Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03689 ATGCACTCCTCCAAACCCCCTCGTCGGAAAGTTGTTCCGGCGAACGGAGATGACTCAGCCGACAAACTTGACCAGCTCCTTCTCTCCTCCGCCATATGCAATAACGAGGACTTAGGTCCCTTTATCCGCAAGACTTTCGCTTCCGGCAAGCCGGAGATCCTCCAGCATCACCTCCGTCACTTCGCTCGCTCCAAAGAATCCGAGATCGAAGAAGTCTGCAAAGCGCACTACCAAGACTTCATCCTCGCCGTTGATGACCTCCGATCCCTCCTCTCCGATGTAGATTCCCTCAAGTCAGCACTCTCCGATTCCAACTCTAAGCTCCAATCCGTCGCTCGCCCTCTCCTCTCTTCCCTCGACGCTTTCGTAGAAACGCGAAACGTCTCGAAGAACGTCAACCTCGCAATCGAATCGGTCCGAAATTGTATTCAGCTAATGGAAGTTTGTTCACGCGCCAACCGTCACCTCTCTGACGAAAACTTCTACATGGCGTTGAAGTGCGTTGACACGATCGAGAGGGAGTACTCGGACAAAACGGCGTCGTCGACACTGAAAAGAATGCTGGAGAAGAAGATTCCAGAGATTCGGTCACACATAGAGAGGAAGGTGAACAAGGAGTTTGGTGACTGGTTGGTTGAGATCCGTGTAGTGAGTCGCAATTTGGGGCAATTGGCGATTGGTCAAGCCTCTTCGGCGAGGCAGAGAGAAGAAGATCTCAGAATTAAGCAGCGTCAAGCGGAGGAACAGAGTAGGCTCAGCGTGAGGGACTGTATTTATGCTTTAGAGGAAGAAGATGATGATGGAATCGCCGGTGGGATCGGAGAGGATGGATATGGTAACAACGGCGGCGGTGGTGGAATTTTGGGTTTTGATTTGACTCCGTTGTATAGGGCTTACCATATTCACCAGACGTTAGGATTAGAAGATCGGTTTAAGCAGTATTATTTTGAGAACAGAAAGCTTCAGTTGACTTCTGACTTTCAGGTATCGTCGATGACGCCTTTTCTTGAATCCCATCAAACATTCTTTGCACAAATTGCGGGTTTCTTTGTGGTGGAGGATAGGGTATTGAGGACTGGAGGTGGTTTGATATCAAAAATGGAAGTTGAGAATTTGTGGGAGATTGCTGTTAGCAAAATGTGTTCTGTACTAGAGGATCAGTTCTCAAGAATGCAAACTGCTAATCATTTATTGTTGATTAAGGATTATGTGAGTCTGTTAGGAGTGACCCTGCGGAGATATGGGTACCCAATTGATGCTTTGCTTGATGTTTTGAGCAAGCATAGGGATAAGTATCATGAGCTGCTATTGTCAGATTGTAGGAAGCAGATTGTAGAGGCCCTTGCTGCTGATAAGTTTGAGCAGATGTTGATGAAGAAAGAGTATGAGTATTCCATGAATGTGCTTTCTTTCCAGATTCAAACATCAGATATTGTTCCTGCTTTTCCTTATTTGGCACCATTTTCATCGACTGTGCCGGATTGTTGTCGCATTGTGCGGTCCTTCATCGAGGATTCCGTGAGTTTCATGTCATATGGTGGGCAGCTTGAGTTCTATGAAGTTGTTAAGAAATATTTGGACAGGCTGCTGGGCGAGGTTTTGGATGAATCTTTATTAAAGCTCATTAATACATCAGTTAGTGGTGTCTCCCAGGCAATGCAAGTGGCAGCTAATATGGTTGTGTTGGAGCGTGCTTGTGATTTTTTCTTTCGTCATGCAGCACAGCTTTCAGGGGTTCCCTTGAGAATGGTGGAGAGGAGCAGAAGGCAGTTCCCTCTGAGAAAAGCTCGTGATGCTGCTGAAGAGATGCTATCTGGGCTACTCAAAGCCAAAGTTGATGGATTCATGACCTTGATTGAGAATGTAAATTGGATGACTGATGAGCCACCTCAGAGTGGAAACGAATATGTGAATGAGGTCATAATTTATTTGGAAATTTTGGTTTCAACTGCTCAACAGATATTGCCATCTCAAGTACTTAAAAGAGTTATGCAGGAAGTTCTTTCTTACATATCAGAGAAGATAGTTGGGACTTTGGTTAGTGATTCTGTTAAGAGGTTTAATGTCAATGCTATTACTGGAATTGATACAGACATCCGGCTCTTAGAATCATTTGCTGATAATCAGGGCCCCCTTTTCTCTGATGGGGATGTTGATCAGTTGAAAACATCACTTGCCGAGTCAAAGCAATTGATTAATTTGTTATCAAGCAATCATCCGGAGAACTTCCTGAATCCAGTGATCAGGGAGAGGAGTTACAATGCTTTAGACCATAAGAAAGTGGTGATTGTTTCAGAAAAGTTGAGGGATCCTTCAGATCGGCTCTTTGGAACCTTTGGTAGTCGTGGGGCCAGGCAGAATCCGAAAAAGAAATCTCTGGATACATTGATAAAAAGACTTAGGGATGTTAGCTGA 2415 0.4505 MHSSKPPRRKVVPANGDDSADKLDQLLLSSAICNNEDLGPFIRKTFASGKPEILQHHLRHFARSKESEIEEVCKAHYQDFILAVDDLRSLLSDVDSLKSALSDSNSKLQSVARPLLSSLDAFVETRNVSKNVNLAIESVRNCIQLMEVCSRANRHLSDENFYMALKCVDTIEREYSDKTASSTLKRMLEKKIPEIRSHIERKVNKEFGDWLVEIRVVSRNLGQLAIGQASSARQREEDLRIKQRQAEEQSRLSVRDCIYALEEEDDDGIAGGIGEDGYGNNGGGGGILGFDLTPLYRAYHIHQTLGLEDRFKQYYFENRKLQLTSDFQVSSMTPFLESHQTFFAQIAGFFVVEDRVLRTGGGLISKMEVENLWEIAVSKMCSVLEDQFSRMQTANHLLLIKDYVSLLGVTLRRYGYPIDALLDVLSKHRDKYHELLLSDCRKQIVEALAADKFEQMLMKKEYEYSMNVLSFQIQTSDIVPAFPYLAPFSSTVPDCCRIVRSFIEDSVSFMSYGGQLEFYEVVKKYLDRLLGEVLDESLLKLINTSVSGVSQAMQVAANMVVLERACDFFFRHAAQLSGVPLRMVERSRRQFPLRKARDAAEEMLSGLLKAKVDGFMTLIENVNWMTDEPPQSGNEYVNEVIIYLEILVSTAQQILPSQVLKRVMQEVLSYISEKIVGTLVSDSVKRFNVNAITGIDTDIRLLESFADNQGPLFSDGDVDQLKTSLAESKQLINLLSSNHPENFLNPVIRERSYNALDHKKVVIVSEKLRDPSDRLFGTFGSRGARQNPKKKSLDTLIKRLRDVS* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03689 804 Pfam Exocyst complex subunit Sec15-like 464 768 IPR046361 -
Rops8g03689 804 PIRSF Sec15 5 804 IPR007225 GO:0006886|GO:0090522
Rops8g03689 804 PANTHER SEC15 13 802 IPR007225 GO:0006886|GO:0090522
Rops8g03689 804 Gene3D Dsl1p vesicle tethering complex, Tip20p subunit, domain D 596 743 IPR042044 -
Rops8g03689 804 FunFam Exocyst complex component 418 586 - -
Rops8g03689 804 Gene3D - 418 590 IPR042045 -
Rops8g03689 804 FunFam Exocyst complex component 596 743 - -
Rops8g03689 804 Coils Coil 229 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03689 Rops-Chr8 77160937 77163584 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03689 K19985 - gmx:100796432 1397.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03689 8 77160937 77163584 Rops8g03689 8 77160937 77163584 ECH