Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03682 ATGGATTTAGAGTTTGAATATCAAGAAAAATATTGGAGGAACTCAAGGGGAGTTCAACTCTTCACCTGCAAATGGGTGCCTTTCTCTTCTCCCAAAGCCTTGGTTTTCCTTTGCCATGGTTATGGCATGGAATGCAGTCGTTTCATGAGAGAATGTGGAGTACGGCTAGCTTGTGCCAGATATGCTGTATATGGTGTCGATTATGAAGGACATGGACGCTCTGAAGGTTCCCGTTGTTACATAAAGAAGTTTGATAACATCGTTGACGATTGTTATGACTTTTTCAAGTCAGTCAGTGAGATCCAAGAGTACAAGGGAAAGGCTAGGTTCTTGTATGGAGAGTCTATGGGAGGAGCAGTGAGCCTACTTTTGCATAAAAAGGACCCTTCATTTTGGGATGGTGCAGTTCTTGTGGCTCCCATGTGTAAGATATCAGAGAAGGTGAAGCCACATCCAGTGGTCATCATCATGTTGACTAAAGTGGAAGATGTGATACCCAAGTGGAAAATAGTTCCCACAAAGGACGTCATCAATGAAGCCTTCAAAGACCCTGCCAAACGAGAAAGAATAAGGAGAAACAAATTGATATACCAGGACAAGCCCCGGCTGAAAACAGCATTAGAAATGTTGAGAACCAGCATGAGTCTTGAAGACAGCTTATATAAGGTGACCATGCCGTTTTTTGTATTGCATGGAGAAGCAGATACAGTGACAGACCCAGAAGTAAGCAGGGCATTATACGAAAGAGCCAGTAGCAAAGATAAGACCATAAAATTGTACCCTGGAATGTGGCATGGCTTAACATCCGGAGAGCCTGATGAGAACATAGAAGATGTCTTTACTGACATAATAATGTGGCTAGACAAACACGCTGATGGGGGTGCTTGTGAGTCTCTACAACTAATTGAGACTAATGACTATGGCATTGAGAAATTGACAACAGTTGCATCACCAGCTAAGTTTGTGCATCAATCACACAGGCGAAGAACTTATCTTTGTGGATTGAAAGGAAGTCGCTTGTTAAACCACTCAGCAACTTAG 1041 0.4265 MDLEFEYQEKYWRNSRGVQLFTCKWVPFSSPKALVFLCHGYGMECSRFMRECGVRLACARYAVYGVDYEGHGRSEGSRCYIKKFDNIVDDCYDFFKSVSEIQEYKGKARFLYGESMGGAVSLLLHKKDPSFWDGAVLVAPMCKISEKVKPHPVVIIMLTKVEDVIPKWKIVPTKDVINEAFKDPAKRERIRRNKLIYQDKPRLKTALEMLRTSMSLEDSLYKVTMPFFVLHGEADTVTDPEVSRALYERASSKDKTIKLYPGMWHGLTSGEPDENIEDVFTDIIMWLDKHADGGACESLQLIETNDYGIEKLTTVASPAKFVHQSHRRRTYLCGLKGSRLLNHSAT* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03682 346 PANTHER PHOSPHOLIPASE-RELATED 13 290 - -
Rops8g03682 346 Pfam Serine aminopeptidase, S33 30 272 IPR022742 -
Rops8g03682 346 PRINTS Alpha/beta hydrolase fold signature 227 241 IPR000073 -
Rops8g03682 346 PRINTS Alpha/beta hydrolase fold signature 111 124 IPR000073 -
Rops8g03682 346 PRINTS Alpha/beta hydrolase fold signature 60 75 IPR000073 -
Rops8g03682 346 SUPERFAMILY alpha/beta-Hydrolases 6 290 IPR029058 -
Rops8g03682 346 Gene3D alpha/beta hydrolase 5 294 IPR029058 -
Rops8g03682 346 FunFam Alpha/beta-Hydrolases superfamily protein 2 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03682 Rops-Chr8 77066898 77070597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03682 48 345 Acyl Lipid Metabolism Gene Families AT2G47630 66.118 9.82e-148 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03682 K18368 - cave:132171090 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03682 8 77066898 77070597 Rops8g03682 8 77066898 77070597 ECH