Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03670 ATGGAAACCAGTACGGCCATGGATGTCGAGGAACAACCTTCACCCAACTCCAACAACGTTAGTAAACGCTTTGGTCTTAAAAATTCTATTCAAACTAACTTCGGAGACGACTATGTTTTTCAAATCGTTCCAAAGGATGATTGGAGTTCAATGGCGGTGTCATTGTCAACGAATGCGATAAAACTGTATTCACCTGTGGCGGGTCATTATTATGGAGAGTGCAAGGGTCACTCTGCAACCATTAACCAGATTTTGTTTTCGGGTCCTTCCAATCCTCATATTTTAAGTTCATGTTCTTCAGATGGAACTATTAGAGCTTGGGACACACGAACATTTCAGCAGGTTTCTATCATCAATGCTGGTTCTTCTCAAGAGGTTTTCAGCTTCTCTTTTGGAGGGCCTAGTGGAAATTTAATTGCTGCCGGTTGTAAATCGCAGATACTCTTCTGGGATTGGAGAAATGAGAAGCAAATTGCATGCCTGGAAGATTCTCATGTGGATGATGTCACTCAGGTTCATTTTATCCCTGATGAAGGCAAGCTTATTTCTGCTTCAGTAGATGGGTTGATCTGCACATTTGATATCACTGGAGATATCAATGATGATGATCATCTAGAGTCAGTGATTAATGTGGGAACTTCAATTGCAAAGGTGGGGATTTTTGGAGAGAGTTATAAGAAGCTTTGGTGTTTAACACACATTGAAACCCTGGGTATTTGGGACCAGAAAGATGCTAGAAATGAAGTAAACTTCTCAGATGCTCGTACTTTAGCTTCTGAAAGCTGGAATTTGGATCATGTTGACTATTTCGTTGATTGTCACTACTCCAAAGAAGCTGAAAAACTATGGGTGATTGGTGGCACTAATGCTGGTGCTTTGGGCTACTTTCCTGTAAATTACAGTGGAGTGACTACAATTGGAGCTGCAGAAGCAATTCTTGAGGGTGGCCATACAAGTGTTGTTAGGAGTATTCTACCCATGTCCAGAATTCATAGTGGACATGACAATAATCATAGCCCTGGCATTTTTGGATGGACAGGTGGGGAAGATGGTCGGCTTTGTTGTTGGTTGTCTGATGATTCCCCTCAAATAAATCAATCTTGGATTTCAAGCACTTTGATCTTGAGGCCAGAAAGAACTCGCAAGAAAAATCGTCATCACCCCTACTAG 1170 0.4154 METSTAMDVEEQPSPNSNNVSKRFGLKNSIQTNFGDDYVFQIVPKDDWSSMAVSLSTNAIKLYSPVAGHYYGECKGHSATINQILFSGPSNPHILSSCSSDGTIRAWDTRTFQQVSIINAGSSQEVFSFSFGGPSGNLIAAGCKSQILFWDWRNEKQIACLEDSHVDDVTQVHFIPDEGKLISASVDGLICTFDITGDINDDDHLESVINVGTSIAKVGIFGESYKKLWCLTHIETLGIWDQKDARNEVNFSDARTLASESWNLDHVDYFVDCHYSKEAEKLWVIGGTNAGALGYFPVNYSGVTTIGAAEAILEGGHTSVVRSILPMSRIHSGHDNNHSPGIFGWTGGEDGRLCCWLSDDSPQINQSWISSTLILRPERTRKKNRHHPY* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03670 389 SMART WD40_4 111 151 IPR001680 GO:0005515
Rops8g03670 389 SMART WD40_4 154 194 IPR001680 GO:0005515
Rops8g03670 389 SMART WD40_4 67 108 IPR001680 GO:0005515
Rops8g03670 389 ProSitePatterns Trp-Asp (WD) repeats signature. 95 109 IPR019775 -
Rops8g03670 389 Gene3D - 16 291 IPR015943 GO:0005515
Rops8g03670 389 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 74 111 - -
Rops8g03670 389 Pfam WD domain, G-beta repeat 73 108 IPR001680 GO:0005515
Rops8g03670 389 PANTHER UNCHARACTERIZED 18 387 IPR039328 -
Rops8g03670 389 MobiDBLite consensus disorder prediction 1 23 - -
Rops8g03670 389 ProSiteProfiles Trp-Asp (WD) repeats profile. 74 117 IPR001680 GO:0005515
Rops8g03670 389 SUPERFAMILY WD40 repeat-like 39 331 IPR036322 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03670 K24758 - gmx:100794786 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03670 8 76947234 76951230 Rops8g03670 8 76947234 76951230 ECH