Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03669 ATGCTTCCTCTTTCCCTTCTCAAGACTGCACAAGGCCACCCTATGTTGGTGGAACTGAAAAATGGGGAGACTTATAACGGCCATTTGGTTAATTGTGATACATGGATGAACATCCATCTTCGAGAAGTCATTTGTACCTCTAAAGATGGAGATAGATTTTGGAGGATGCCTGAATGCTACATACGAGGCAATACAATTAAGTACCTTCGAGTTCCTGATGAGGTTATTGACAAAGTTCAGGAAGAAACCAAGAACCGTGCAGATCGCAAACCACCTGGTCTGGGACGCGGGAGGGGAAGAGGTAGAGAGGATGGTGCTGGTGGACGCCAAGCAAGAGGAATTGGGCGTGGTCTTGATGATGGTGCTAAGGGAGCTGGAGGAGGCCGAGGCAGGGGTGGCCCAGGTGGAAAGCCTGGTGGAAACAGAGGGCGAGGCAGAGGTTGA 444 0.5023 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKNRADRKPPGLGRGRGRGREDGAGGRQARGIGRGLDDGAKGAGGGRGRGGPGGKPGGNRGRGRG* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03669 147 MobiDBLite consensus disorder prediction 80 109 - -
Rops8g03669 147 SMART Sm3 5 71 IPR001163 -
Rops8g03669 147 ProSiteProfiles Sm domain profile. 2 75 IPR047575 GO:0003723
Rops8g03669 147 Gene3D - 1 83 - -
Rops8g03669 147 SUPERFAMILY Sm-like ribonucleoproteins 3 132 IPR010920 -
Rops8g03669 147 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 2 127 IPR027141 GO:0006396
Rops8g03669 147 FunFam U6 snRNA-associated Sm-like protein LSm4 1 83 - -
Rops8g03669 147 CDD LSm4 2 77 IPR034101 GO:0000398|GO:0000956
Rops8g03669 147 Pfam LSM domain 6 70 IPR001163 -
Rops8g03669 147 MobiDBLite consensus disorder prediction 80 147 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03669 K12623 - vvi:100241738 212.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03669 8 76944016 76946392 Rops8g03669 8 76944016 76946392 ECH