Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03668 ATGGAGACCATGTGTCATTGTTCTAGCTTCCTCCTTCCGCCGGAGAATCCAAACGCTTCCTCTTCTTCTCTTTCTCTAACCTACGCTCTTGTTGTTCTCAATCAACGCCTTCCCAGATTCGCTCCTCTGCTTTGGGAACACGCACGGGTACGAGTTTGCGCTGATGGAGGTGCCAATCGGGTGTATGATGAAATGCCTCTTTTCTTCCCTCATCAACATCCTTCCCATGTTCGCACCAGGTACAAGCCTGATGTAATCAAAGGTGACATGGATTCTATCAGGACAGAAGTGCTTGATTTCTATGCAGAGCTGGGAACTAAGATAGTTGACGAGTCTGATGATCAGGACACGACAGATTTACACAAATGCGTAGCATACATACGTGACCTCATACCAAATACTGATAAATCAACACTTTGCATTCTTGCTGCTGGAGCCCTTGGTGGGAGATTTGACCATGAGATGGGAAATATTAATGTGCTGTGCCGATTCTCTGATGCACGAATTATCCTTCTATCTGATGATTGCCTCATTCACCTTCTTTCAAAGAATCACTCTCATAAGATCTTTATTCAATCTTCTGTTGAGGGTCCGCATTGTGGACTCATTCCCATTGGGATGCCATCTGGAAGTTCTACAACCACGGGACTCCAGTGGGACCTCAATAACACGGAAATGAGATTTGGAGGTTTAGTAAGCACGTCAAATATTGTAAAAGGAGATGTAGTAACGGTACAGTCTGATTCAGATCTTCTTTGGACTATTTCTATCAAGAAGCCCTAG 783 0.4444 METMCHCSSFLLPPENPNASSSSLSLTYALVVLNQRLPRFAPLLWEHARVRVCADGGANRVYDEMPLFFPHQHPSHVRTRYKPDVIKGDMDSIRTEVLDFYAELGTKIVDESDDQDTTDLHKCVAYIRDLIPNTDKSTLCILAAGALGGRFDHEMGNINVLCRFSDARIILLSDDCLIHLLSKNHSHKIFIQSSVEGPHCGLIPIGMPSGSSTTTGLQWDLNNTEMRFGGLVSTSNIVKGDVVTVQSDSDLLWTISIKKP* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03668 260 Gene3D - 169 259 - -
Rops8g03668 260 SUPERFAMILY Thiamin pyrophosphokinase, catalytic domain 27 177 IPR036759 GO:0004788|GO:0005524|GO:0009229
Rops8g03668 260 SMART TPK_B1_binding_a_2_a 185 251 IPR007373 GO:0009229|GO:0030975
Rops8g03668 260 SUPERFAMILY Thiamin pyrophosphokinase, substrate-binding domain 179 259 IPR036371 GO:0009229
Rops8g03668 260 Pfam Thiamin pyrophosphokinase, vitamin B1 binding domain 187 252 IPR007373 GO:0009229|GO:0030975
Rops8g03668 260 CDD TPK 29 255 IPR007371 GO:0004788|GO:0005524|GO:0009229
Rops8g03668 260 FunFam Thiamine pyrophosphokinase 170 259 - -
Rops8g03668 260 NCBIfam thiamine diphosphokinase 30 255 IPR006282 GO:0004788|GO:0006772
Rops8g03668 260 Pfam Thiamin pyrophosphokinase, catalytic domain 43 167 IPR007371 GO:0004788|GO:0005524|GO:0009229
Rops8g03668 260 PIRSF TPK1 2 260 IPR016966 GO:0004788|GO:0005524|GO:0009229
Rops8g03668 260 FunFam Thiamine pyrophosphokinase 26 168 - -
Rops8g03668 260 Gene3D Thiamin pyrophosphokinase, catalytic domain 28 168 IPR036759 GO:0004788|GO:0005524|GO:0009229
Rops8g03668 260 PANTHER THIAMIN PYROPHOSPHOKINASE 4 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03668 Rops-Chr8 76937420 76940171 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03668 K00949 - gmx:100786303 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03668 8 76937420 76940171 Rops8g03668 8 76937420 76940171 ECH