Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03667 ATGTTAGAGAAGTGTTTGGGAGCTCAAAGGGCAAGAAGATTCCAGAGAGGTCTAAGCCATTGCAAGGTTACGATCCTCTGTCTCGTCCTCACCATTGTTGTCCTACGTGGCACCATTGGTGCCGGAAAGTTCGGCACGCCGGAGCAGGATATCAACAACCTTCGCAACCGTTTCTACTCCAGAAAGCTACCGGAGCCTCATCGTCTTCTTGGGGAGCTTCATTCTACGACGTCTTCTTCTTCTTCTTCTTCTTCCTCCTCCTCTGGTTCTGATAGTTCCACTTCTTCCACCACCACCAATTACAATGCATTTGATATCAACACCATATTGGTTGATGAGGAAGAAGAAAGGGACGAGGAGAAACGAAACCTGAACGAGCCTTATCATTTGGGACCTAAAATCTCGAATTGGGATGAACAGAGATCAAGTTGGCTTCGTGAAAACCCCAATTTCTCGAATTTCATTCGACCCAATAAGCCTCGTGTGCTTCTTGTAACTGGGTCGTCGCCGAAACCGTGTGAGAATCCGGTGGGTGATCATTACTTGTTGAAGTCTATTAAGAATAAAATTGATTATTGTCGTTTGCATGGTATTGAGGTGTTTTACAATATGGCTCTTTTGGATGCTGAAATGGCTGGGTTTTGGGCCAAGCTTCCTTTGATTAGGAAGCTTCTTTTGTCACACCCTGAGGTGGAATTCTTGTGGTGGATGGATAGTGATGCCATGTTCACGGATATGGCATTTGAAGTGCCATGGGAAAGGTATAAAGATTATAACTTGGTGATGCATGGGTGGAATGAGATGGTATATGATCACAAGAATTGGATTGGGTTGAACACTGGGAGCTTTTTGTTGAGGAATTGTCAGTGGTCTTTGGATATTCTTGATGCATGGGCACCAATGGGGCCTAAAGGGAAAGTTAGGGATGAGGCTGGAAAAGTACTCACACGTGAACTCAAGGATAGGCCTGTTTTTGAAGCTGATGATCAATCAGCAATGGTTTATTTGTTGGCAAAACAAAGGGACATGTGGGGTGATAAGGTTTATCTTGAGAATGGTTATTACTTGCACGGTTACTGGGGTATTTTGGTTGATAGATATGAGGAGATGATTGAGAATTACCATCCCGGTCTTGGTGATCATAGGTGGCCCTTGGTGACTCATTTTGTTGGTTGCAAGCCTTGTGGGAAGTTTGGGGATTACCCGGTTGAGAGATGCTTGAGGCAGATGGATAGAGCTTTCAATTTTGGAGATAACCAGATACTGCAGATTTATGGGTTCACTCACAAGTCATTGGCTAGTAGGAGAGTTAAGAGAATACGGAATGAGACTAACAATCCTCTTGAGGTCAAAGATGAACTTGGCTTGCTTCATCCAGCATTTAAAGCAGTTGAGGTATCATCATCTAGATGA 1413 0.4402 MLEKCLGAQRARRFQRGLSHCKVTILCLVLTIVVLRGTIGAGKFGTPEQDINNLRNRFYSRKLPEPHRLLGELHSTTSSSSSSSSSSSGSDSSTSSTTTNYNAFDINTILVDEEEERDEEKRNLNEPYHLGPKISNWDEQRSSWLRENPNFSNFIRPNKPRVLLVTGSSPKPCENPVGDHYLLKSIKNKIDYCRLHGIEVFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDYNLVMHGWNEMVYDHKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKVRDEAGKVLTRELKDRPVFEADDQSAMVYLLAKQRDMWGDKVYLENGYYLHGYWGILVDRYEEMIENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLRQMDRAFNFGDNQILQIYGFTHKSLASRRVKRIRNETNNPLEVKDELGLLHPAFKAVEVSSSR* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03667 470 FunFam xyloglucan 6-xylosyltransferase 2 158 309 - -
Rops8g03667 470 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 7 454 IPR008630 GO:0016020|GO:0016757
Rops8g03667 470 MobiDBLite consensus disorder prediction 73 99 - -
Rops8g03667 470 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 158 310 IPR029044 -
Rops8g03667 470 Pfam galactosyl transferase GMA12/MNN10 family 159 398 IPR008630 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03667 Rops-Chr8 76929433 76931294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03667 1 470 Glycosyltransferase AT4G02500 80.426 0.0 770
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03667 K08238 - gmx:100794266 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03667 8 76929433 76931294 Rops8g03667 8 76929433 76931294 ECH