Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03663 ATGGCTGTGGTTGCAGCACAGCAATTCCTCTGCTTCTCAGAATCAAATTGGAGAATTAGAACAAGGCCATGCTTTTCCCCTTACAGTGCCATTCTTCTTCTACGTTCACACAAAAAGATTCAATTTTCACTCATTTCATGCTCTTCTTCACAGACCCCAGAAGCTGAAACTCAAACTGCTGAATCTTGCGTCAATTTGGGTCTTCAGCTCTTCTCCAAAGGACGGGTTAAAGATGCTTTTACCCAGTTTGAAACAGCGCTTACCTTGAATCCCAATGCTGTGGAGGCTCAAGCTGCGCTCTATAACAAAGCTTGCTGTCATGCATACAGAGGAGAAGGAAAGAAAGCTGCTGATTGTCTCCGCACTGCTTTGAGGGATTACAACCTAAAATTTGGTACAATTCTCAATGATCCAGACTTGGCCTCCTTCAGAGCTTTGCCTGAATTCAAAGAACTACAAGAAGAGGCCAGGCTGGGTGGGGAAGATATTGGCTACAGTTTTCGCAGAGATCTAAAACTTATCAGTGAAGTTCAAGCACCATTTCGTGGGGTTAGGAGATTCTTTTATGTAGCACTGATGGCAGCTGCAGGAATATCATTGTTGTTTACCGTGCCCAGGCTATTTCGTGCAATTCAAGGTGGTGATGATGCTCCTGATCTCTTGGAAACTGCTGGGAATGCTGCCATTAACATTGGAGGTATTGTTGTTCTTGGGGCATTATTCTTTTGGGACAATAAAAAGGAGGAGGAACAACTTGAACAAATATCCCGAAATGAGACACTATCAAGGTTGCCTTTGCGCCTTTCAACGAATCGCATAGTTGAACTTGTGCAGCTACGGGACACAGTTCGGCCGGTTATATTGGCAGGGAAGAAAGAAACAGTATCTCTGGCTTTGCAAAAAGCAGAGAGATTTCGCACTGATCTCTTAAGACGTGGTGTTCTGTTAGTTCCTGTCATCTGGGGAGAAGGTAGAGAAACAAAAATTGAAAAGAAAGGTTTTGGTCTTCAACCAAAGGCTGCCGAGGCTCTTCCATCCATTGGGGAAGATTTTGAGAAGCGAACACAGTCCATAATTGCAAAATCAAAGTTGAAAGCTGAAATTAGGTTCAAGGCTGAGGTTGTATCACCAGCAGAATGGGAACGGTGGATAAGAGATCAGCAGAAGGCTGAGGGAGTTCCAGTTGGTGAAGACGTGTACATAATACTACGCTTAGATGGGCGGGTTCGAAGATCAGGGAAAGGTATGCCTGATTGGCAGCAAATTGCCAAGGAGCTGCCACCAATGGAAGCATTTTTAAGCAAGCTGGAAAGATGA 1317 0.4442 MAVVAAQQFLCFSESNWRIRTRPCFSPYSAILLLRSHKKIQFSLISCSSSQTPEAETQTAESCVNLGLQLFSKGRVKDAFTQFETALTLNPNAVEAQAALYNKACCHAYRGEGKKAADCLRTALRDYNLKFGTILNDPDLASFRALPEFKELQEEARLGGEDIGYSFRRDLKLISEVQAPFRGVRRFFYVALMAAAGISLLFTVPRLFRAIQGGDDAPDLLETAGNAAINIGGIVVLGALFFWDNKKEEEQLEQISRNETLSRLPLRLSTNRIVELVQLRDTVRPVILAGKKETVSLALQKAERFRTDLLRRGVLLVPVIWGEGRETKIEKKGFGLQPKAAEALPSIGEDFEKRTQSIIAKSKLKAEIRFKAEVVSPAEWERWIRDQQKAEGVPVGEDVYIILRLDGRVRRSGKGMPDWQQIAKELPPMEAFLSKLER* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03663 438 Gene3D Tetratricopeptide repeat domain 48 145 IPR011990 GO:0005515
Rops8g03663 438 SUPERFAMILY TPR-like 57 125 IPR011990 GO:0005515
Rops8g03663 438 ProSiteProfiles TPR repeat profile. 60 93 IPR019734 GO:0005515
Rops8g03663 438 FunFam Protein LOW PSII ACCUMULATION 1, chloroplastic 47 153 - -
Rops8g03663 438 Pfam Low psii accumulation1 / Rep27 168 245 IPR021883 -
Rops8g03663 438 PANTHER PROTEIN LOW PSII ACCUMULATION 1, CHLOROPLASTIC 40 436 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03663 - - gmx:100784188 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03663 8 76906126 76910413 Rops8g03663 8 76906126 76910413 ECH