Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03661 ATGACAACCAAGCCAGCTGAAGAAGCTCCTCCTGGAGAAACCCTCAAGTACCAGAAGTGGGTTTTGAGAGTCTTGATCCATTGCGATGGCTGCAAAAAGAGAGTCAAGAAAGTTCTTCAGGGAATTGAAGGGGTTTACACAACAGAGGTTGATTCTCAGCAGCACAAGGTTACAGTCACTGGTAACGTGGATGCTGAGACTCTCATCAAGAGGCTTTCAAGATCAGGGAAATTAGTGGAGCTTTGGCCAGAAAAACCAGCTGAGAAGAAAGACAAGAAGCCTGGAAAATCCAAGGGTGGCGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGATATGAATAAGGAGAAGGAAAACCAAAATAGAGAACCAGTTGGTGACGATGGTTCCACTGAGGGTTGTATAGATGCTGCTGGTGAAGATTCAGACAAAGAAGGTCATAGTGATGAAGATGAGGGTGCTGCTGGCGGAAGTGGTGGTGGTGAAGGTGGCAAAAAGAAGAAGAAAAAGAAGAAGAAGAAGAAGGGAGAAAACAATGGTTCTGCTCTTCCAAATAATGAAGGAGGAAAAAAAATTAGTACAGTTGATACACCAATCCCTGAAAACAAGGCCACTTCCAAGGATCTTATTAACCCTCCAATTCAACACGCCTACTCATATCCACCACCTATGTACTATTCTCCACCTCCACCCCCAGCATATGGATTAAGTTATAACACAACATATCCTATTTCTAGTGCTTCTTATTATGTTGATGCTCCTATCATGCCCATGCATGCTTATACTACTGCATATTCTAGACTGCCGCCACCTCCTCCACCGTCTGATCCCATCAAGCACTATGGTGATGATGATGACAATGAATATGAAGGTGGATATTGCTCCATTATGTGA 897 0.4459 MTTKPAEEAPPGETLKYQKWVLRVLIHCDGCKKRVKKVLQGIEGVYTTEVDSQQHKVTVTGNVDAETLIKRLSRSGKLVELWPEKPAEKKDKKPGKSKGGGGGGGGGGGGGGDMNKEKENQNREPVGDDGSTEGCIDAAGEDSDKEGHSDEDEGAAGGSGGGEGGKKKKKKKKKKKGENNGSALPNNEGGKKISTVDTPIPENKATSKDLINPPIQHAYSYPPPMYYSPPPPPAYGLSYNTTYPISSASYYVDAPIMPMHAYTTAYSRLPPPPPPSDPIKHYGDDDDNEYEGGYCSIM* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03661 298 CDD HMA 21 77 IPR006121 GO:0046872
Rops8g03661 298 MobiDBLite consensus disorder prediction 80 216 - -
Rops8g03661 298 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 15 298 - -
Rops8g03661 298 MobiDBLite consensus disorder prediction 80 97 - -
Rops8g03661 298 Gene3D - 15 79 - -
Rops8g03661 298 MobiDBLite consensus disorder prediction 138 153 - -
Rops8g03661 298 MobiDBLite consensus disorder prediction 268 298 - -
Rops8g03661 298 Pfam Heavy-metal-associated domain 23 77 IPR006121 GO:0046872
Rops8g03661 298 SUPERFAMILY HMA, heavy metal-associated domain 18 82 IPR036163 GO:0046872
Rops8g03661 298 ProSiteProfiles Heavy-metal-associated domain profile. 17 80 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03661 Rops-Chr8 76883735 76885018 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03661 - - gmx:100791626 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03661 8 76883735 76885018 Rops8g03661 8 76883735 76885018 ECH