Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03648 ATGGATCGAAGAGGGAGTTGGATTTGGATTTGGATGAAGGGAGGTAGGGATGCAATAAAGGGGTTAGGGTTAGGGTTAGGGTTAGGTTTGGATTCTGGGAGGAGAGAGATGGTGGAGTCTGAACTTGAAGAAGGAGAAGCTTGCTCATACCAGAACCATGAAGATTACGATGCCACCGTTGATCCCGATGTTTCCCTCTCTTACATTGATGAAAAAATTCAAGATGTTCTGGGACACTTTCAGAAAGATTTTGAAGGTGGGGTGTCTGCAGATAATCTGGGGGCAAAATTTGGTGGTTATGGATCATTTTTGCCTACCTATCAACGCTCTCCTGTTTGGTCTCATCCAAGGACTCCACAAAAAATTCAGAGTCAAAATACACCCAGATCTCCTAATAATTTGAATCTGGAGGGTGGGCAAGGGGATGCGGTACAATGTTCAACAGGAACTCAGTCATTAAAACTTGGACCAGGTTCTGCTACCTCCTCGAGGTTGGCTGCAATTAAGGGACTCCCTTTAGATGATGGAACTAATCAACAAAAATGCATGACAATTAGTAGTGCTGAGGCACTAACTTCTAAGTATGATTCTCTAAACATGAAAGCTACTAACATGTCTGACCAGAAGACACTGAAGGTTCGAATCAAAGTGGGTCCTGACCATTTGTCAACCCAGAAAAATGCTGCGATATACAGTGGACTTGGTCTAGATGTGTCACCATCATCATCACCGGATGACAGCCCTTCTGAAAGTGAAGGAATTTCTCGGGGTCCTCTAGACGCTCCCTTTGAATCTCCAACTATTATCCTTAAGATTATGACAACCCTCCCTATGCTTTCGTCGCCTCTTCTTGATGAACTCATTGAATTAACTGAAAAGGAAACACGAACCAGAGATAGCATTCATGGTCCCGTTCATATGGATGATCCAGAAAGTTCTGGCATGTTAGTAAATGACTTTAATATTGTAAAAGGTGACAGAAAATTGTCAAGAAGGAAGAAAGTGAAGTCTCTGGAGGGTTATGAGTCCTCAATGGAAATCAAGGGTGGCAATAAGAAGAATACTCAGAATGATGTTGGAGTGCTGTCAAGGAAGGAACAAGGTACAGAAGCATCAGCTGTGGAGGAGCTAGTTTCAAAAACCATGAAGCTTCCACTTTTATCCTGTTCATATTCTTTCAGTGATGACTCAGTAAAGGCTGTTGATGGGCCATGTGATTCATTGAAGGAAACCAACAAGGGTATGGAGAGGGAGAAAACCTTCTCTGATCAGGCACAAAAGGAACAGGTGGAGCCAACATCCACTGAAGTGAATGGTTTTGCTGAGAGGGCAAAGGGAAGTTCAGGAAGAAAAGTTGTGGGAGATAAAGTTTCACTTGATGACTTATCAATTTATACTGTGAAAGACAATCCTCATGGAGATAAAATATGTAACTCAGCAATTGCTGACTCTAATGTTTCCAAAGTTTGGACAGCGTCAAACACTGAATGCATAGAGCCTCCTAAGAAGGCTAATCAGAGAGGTAGCCTGTCTGAACAAGACAGTACAGCATTACCTGTCATGACTGAACCTCCATTTCCTGGGGGGAAGAAGAAGTCAAAGGGAAGTCATGGCACCATGGTTATAGAGAGGGAGAAAGAAAACATGAAGGTTGGATCCTCTTTGGTTCCTAAAACTAAAAGGAATTCTGATGATGGTTCTGCATCAAAAAATGAAACTGAAGATGTCAAAGTACAAAAGGGTCTTGGAAAGGTTAGAGATACTTATAGAGATTTCTTTGGGGAATTGGAAGAAGATGAAGACAGAATTGATTCACTGGAAACCCCTTATGAGGATAAATTGAAGGAATCTGATGTGGTCGAGGGGAGAACACCTACAACTAATTATGGAGCAAAGGAAAGATCAGGTGGTAAGAAAGTTGACAAGCCATTGACAGCAGAAGTAAACCCTAAAACATCCACAAATGTCCGGTGCACCGGAAATGCACATGGTAATGATGCAGAGAGTGGAAAAGGGGTCCCTGTAATGGAAGATAATTGGGTACAGTGTGACAGGTGTCATAAATGGCGTCTTCTTCCTGTTGGCACAAATCCTGATCACCTACCTGAAAAGTGGCTGTGTAGTATGCTTAATTGGCTGCCTGACATGAATCGATGTAGTTTTAGTGAGGATGAAACCACCAAAGCCCTTATTGCATTATACCAAGGGCCTCCTCTTGATGGTCAGAACAATTTGCAAAATGTCTCTGGAAGTGTTATGGTGGGAGGAACCATGGCAACTTTCCGGCATCCTGATCAACACCAGCTAAATAATGATCTGCATGCAGTGCCTGGGGGGAAGAAAAAAGTTGTGAAAGAAATATCAAATTCTACACATAAAGATGGCTTTTCTCCATTATCACATTCTATAAAGAAAAACGTGCAATCATCAGTGAAAAGTAGGAGCTTAAATGATGTGAACAATTCTCCTGTTGTGAATGAGGCTGATGTTCTAGGGGAGAAACACAAAAATAAGCAGAGAATGCTGGAACAGAATTCTGATAGAGGTGATATGAAGAAGGTGAAAAGCAAGAGGGACGCTGATCAAGATTGTTTGAGGCCTTCCAAAAAAGGTAAGACTGACAAGGTTCATTCTACCGATGAAGAGTGGATTCCAGAACAGAATGGGACCACTAGGAAGGTGGGTCATAGCTCAAACAGCACTTTTCCAACTACTTCAGTTGGCAAAGATCGACCTAGACAGAAAGACCACTCCTCCTCAAGGGACTCCAAATCAGGAAAAGACAGGCTGCCAGTTTCTGCTGAAAAGACAAAAGATAAGGGTCAGGGTTCCTTCGATGAGGGATCCCTGGATTTGTGGAATTATGATTCCATTGGTAGTGTGAAAAAGAGGAAATTGAAGGAGTATCAGGATGCTCAAACTTGTAGCACAGGTAATCCTCACCTACAGGAGAGCAGAATTTCTGAGCAGGAGTTCAGTGATTCCAGGAAGGAAAAGAAAGCAAGAAATTCAAGATCTGAAGGTAAAGAATCAAGTGCCAGTAAAGGCAGTGGTAGGACTGACAAAAAAGTTAGTCATACAAAGAACCAGAAATTCAGGCAAAATCCAGGTAGCAGTCTGTCACAACGGAGCTTGGATGGCATGGACCCTTTAAAAAGGGACTTGGGGTCTGTCCAGGCTTCTGTTGCTGCCACTTCAAGCTCTTCTAAGGTTTCTGGCTCACATAAAACCAAAGCCAGCTTCCAGGAAGTTAAAGGCTCACCTGTGGAATCGGTTTCTTCATCGCCTTTAAGAATTTTAAATACTGATAAGTTTGCAAACAGGGAACTTATGGGGAAAGATGACTCTCATGATATTGCTACTATGGATAGTCCAAGAAGATGCTCAGATGGTGAAGATGATGGTGCAAGTGATCGATCTAGAAAGGCTAGGAAGGACAAATCTTTCACCATGACCCACAGGTCTGATTTTCAGAACAGGGGTGTTAATCATCTGTCTGATACAAAACCTAAAGCTCAAACAACCAGGCATTGTACCAGTGGTGGTGTGGACACTATAGCTCAAGACGGGGCATATCCAGGTGGAGAGCAGATTAAGCATCAAGGTGAAGACAGAACTGATGTTTATTATGCTAATGTGCCTCGTGCAAGGAAGAGTGGCATGGAATCAGGTTTGGAGGACACCAATGAGAGCTGTAAGTCAGAGTCCCATGCAGAAAAAGTCAAGAATACTAGTTCTCCTGGTCAACTGCAAGATCAGTCTCCTCCACGTGAGGCAAAACATAGGGAAGGCAAAGTTAAGTTGCAGGAGAAGTCTGGGTTCAAGCCTGACCAAAGTGAAAATGTACATGCTGGAATGAAAGATCCTCATACAGGAAAAAATGAGAGTGGGAAAAAAGAGAATCACTTAAATAGAGGGCATGACTTTCAAGAAGCTAGCATAGATGCCCCATGCAAGGCATTACATGCTCCCAGTCAGAATCAGTTGCCAGACTGTGATACTGAAAGATCTTCAAAAAGGTCTCTTTCGGAAAGAACAGATCAAGAAGTACATGGAAAAGGAAAGTCTTTGTCATCGTTGCCCTCTGGAGGATCTCAAGTTGAGACGTCGAGTCGTTGCCCACGACCAGTTGTTGGTTTCCATAAAGGAAATGGAGATATGGAAGTTGATCCTTCAAAAGTTGACGATGTGTCAAAGCTGCCAAAAAAGCAATTGAAAAAGGCTGATTATCAAAATGGAACTCAGCAAATTGGTTCAAGAAATCCAGCACTTAATGGACACCGGTCCAAGGAGCTTGATGCCCCTAGTCCTGTTAGAAGGGATTCTTACAGCCATGCAGCTAACAATGCTGTGAAAGAAGCTAAAGATCTTAAGCATCTGGCTGATCGTCTTAAGAATTCTGGATCCACTCTTGAGAGCACTAGTCTTTACTTCCAGGCAGCTCTCAAGTTTCTTCATGGAGCCTCTCTGTTAGAATCGGGCAACAATGATAATGCTAAACATAGTGAGATGATTCAATCAAAGCAAATGTACAGTAGCACAGCAAAATTGTGCGAGTTCTGTGCCCATGAATATGAGAAATCAAAAGACATGGCTTCAGCTGCTCTGGCCTACAAATGCATGGAGGTGGCATATATGAGGGTAATATATTCTTCACACACTAGTGCAAGCAGAGATCGGCATGAGTTGCACACAGCCCTGCAAATGATTACTCTTGGCGAGTCTCCATCATCATCTGCCTCTGACATAGACAATGTTAACAACTCTATGGCAGTTGACAAGGTTACTTTATCCAAAAATGTCAATTCACCCCAAGTTGCTGGAAACCATGTTGTTGCTGCACGAAATCGTCCCAATTTTCTGCGGTTGCTCAATTTTGCTCAGGATGTGAATTTTGCCATGGAAGCCTCAAGGAAATCACGGAATGCTTTTGCAGCTGCTAATTCAAGTCCAGGTGTGGGCAAGCATGTGGATGGTATCTCCTCTATCAAGAAGGCTCTTGATTTTAGCTTTCATGATGTGGAGGGGTTACTACGTTTGGAAGGAGAGTCAAAGAGAGTCAGACTAAAGTTGGCTATTTGTCTTATACAATTTTGGGATTAG 5103 0.4276 MDRRGSWIWIWMKGGRDAIKGLGLGLGLGLDSGRREMVESELEEGEACSYQNHEDYDATVDPDVSLSYIDEKIQDVLGHFQKDFEGGVSADNLGAKFGGYGSFLPTYQRSPVWSHPRTPQKIQSQNTPRSPNNLNLEGGQGDAVQCSTGTQSLKLGPGSATSSRLAAIKGLPLDDGTNQQKCMTISSAEALTSKYDSLNMKATNMSDQKTLKVRIKVGPDHLSTQKNAAIYSGLGLDVSPSSSPDDSPSESEGISRGPLDAPFESPTIILKIMTTLPMLSSPLLDELIELTEKETRTRDSIHGPVHMDDPESSGMLVNDFNIVKGDRKLSRRKKVKSLEGYESSMEIKGGNKKNTQNDVGVLSRKEQGTEASAVEELVSKTMKLPLLSCSYSFSDDSVKAVDGPCDSLKETNKGMEREKTFSDQAQKEQVEPTSTEVNGFAERAKGSSGRKVVGDKVSLDDLSIYTVKDNPHGDKICNSAIADSNVSKVWTASNTECIEPPKKANQRGSLSEQDSTALPVMTEPPFPGGKKKSKGSHGTMVIEREKENMKVGSSLVPKTKRNSDDGSASKNETEDVKVQKGLGKVRDTYRDFFGELEEDEDRIDSLETPYEDKLKESDVVEGRTPTTNYGAKERSGGKKVDKPLTAEVNPKTSTNVRCTGNAHGNDAESGKGVPVMEDNWVQCDRCHKWRLLPVGTNPDHLPEKWLCSMLNWLPDMNRCSFSEDETTKALIALYQGPPLDGQNNLQNVSGSVMVGGTMATFRHPDQHQLNNDLHAVPGGKKKVVKEISNSTHKDGFSPLSHSIKKNVQSSVKSRSLNDVNNSPVVNEADVLGEKHKNKQRMLEQNSDRGDMKKVKSKRDADQDCLRPSKKGKTDKVHSTDEEWIPEQNGTTRKVGHSSNSTFPTTSVGKDRPRQKDHSSSRDSKSGKDRLPVSAEKTKDKGQGSFDEGSLDLWNYDSIGSVKKRKLKEYQDAQTCSTGNPHLQESRISEQEFSDSRKEKKARNSRSEGKESSASKGSGRTDKKVSHTKNQKFRQNPGSSLSQRSLDGMDPLKRDLGSVQASVAATSSSSKVSGSHKTKASFQEVKGSPVESVSSSPLRILNTDKFANRELMGKDDSHDIATMDSPRRCSDGEDDGASDRSRKARKDKSFTMTHRSDFQNRGVNHLSDTKPKAQTTRHCTSGGVDTIAQDGAYPGGEQIKHQGEDRTDVYYANVPRARKSGMESGLEDTNESCKSESHAEKVKNTSSPGQLQDQSPPREAKHREGKVKLQEKSGFKPDQSENVHAGMKDPHTGKNESGKKENHLNRGHDFQEASIDAPCKALHAPSQNQLPDCDTERSSKRSLSERTDQEVHGKGKSLSSLPSGGSQVETSSRCPRPVVGFHKGNGDMEVDPSKVDDVSKLPKKQLKKADYQNGTQQIGSRNPALNGHRSKELDAPSPVRRDSYSHAANNAVKEAKDLKHLADRLKNSGSTLESTSLYFQAALKFLHGASLLESGNNDNAKHSEMIQSKQMYSSTAKLCEFCAHEYEKSKDMASAALAYKCMEVAYMRVIYSSHTSASRDRHELHTALQMITLGESPSSSASDIDNVNNSMAVDKVTLSKNVNSPQVAGNHVVAARNRPNFLRLLNFAQDVNFAMEASRKSRNAFAAANSSPGVGKHVDGISSIKKALDFSFHDVEGLLRLEGESKRVRLKLAICLIQFWD* 1701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03648 1700 PANTHER CW-TYPE ZINC FINGER 35 1680 - -
Rops8g03648 1700 MobiDBLite consensus disorder prediction 829 882 - -
Rops8g03648 1700 MobiDBLite consensus disorder prediction 1059 1095 - -
Rops8g03648 1700 MobiDBLite consensus disorder prediction 1154 1182 - -
Rops8g03648 1700 MobiDBLite consensus disorder prediction 499 518 - -
Rops8g03648 1700 MobiDBLite consensus disorder prediction 235 250 - -
Rops8g03648 1700 MobiDBLite consensus disorder prediction 967 1095 - -
Rops8g03648 1700 MobiDBLite consensus disorder prediction 618 673 - -
Rops8g03648 1700 MobiDBLite consensus disorder prediction 1408 1423 - -
Rops8g03648 1700 Pfam CW-type Zinc Finger 679 725 IPR011124 GO:0008270
Rops8g03648 1700 ProSiteProfiles Zinc finger CW-type profile. 674 727 IPR011124 GO:0008270
Rops8g03648 1700 MobiDBLite consensus disorder prediction 1255 1308 - -
Rops8g03648 1700 MobiDBLite consensus disorder prediction 235 260 - -
Rops8g03648 1700 MobiDBLite consensus disorder prediction 1220 1240 - -
Rops8g03648 1700 MobiDBLite consensus disorder prediction 1030 1045 - -
Rops8g03648 1700 Coils Coil 1447 1467 - -
Rops8g03648 1700 MobiDBLite consensus disorder prediction 1108 1153 - -
Rops8g03648 1700 MobiDBLite consensus disorder prediction 536 551 - -
Rops8g03648 1700 MobiDBLite consensus disorder prediction 890 908 - -
Rops8g03648 1700 MobiDBLite consensus disorder prediction 987 1028 - -
Rops8g03648 1700 MobiDBLite consensus disorder prediction 1333 1352 - -
Rops8g03648 1700 MobiDBLite consensus disorder prediction 416 436 - -
Rops8g03648 1700 MobiDBLite consensus disorder prediction 790 824 - -
Rops8g03648 1700 MobiDBLite consensus disorder prediction 1386 1406 - -
Rops8g03648 1700 MobiDBLite consensus disorder prediction 1322 1441 - -
Rops8g03648 1700 MobiDBLite consensus disorder prediction 909 945 - -
Rops8g03648 1700 MobiDBLite consensus disorder prediction 971 986 - -
Rops8g03648 1700 MobiDBLite consensus disorder prediction 563 579 - -
Rops8g03648 1700 MobiDBLite consensus disorder prediction 499 579 - -
Rops8g03648 1700 MobiDBLite consensus disorder prediction 1108 1308 - -
Rops8g03648 1700 MobiDBLite consensus disorder prediction 112 134 - -
Rops8g03648 1700 Gene3D - 667 729 - -
Rops8g03648 1700 MobiDBLite consensus disorder prediction 647 662 - -
Rops8g03648 1700 MobiDBLite consensus disorder prediction 787 953 - -
Rops8g03648 1700 MobiDBLite consensus disorder prediction 1353 1372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03648 Rops-Chr8 76666914 76676403 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03648 - - gmx:100806105 2502.24