Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03644 ATGCTTCTTCAACACAGGTGGTCTCTTGGTCTTGTTCATCGCCTTTTCCATCACCATCACCATCACCAACTCCTATTACCCCGAAAGTTTCAATCATTCTCACCTCTCAAAGTGAACAAGGTCCTCTCAATGGCATCGTCTCATACTCATTCTCATAACCACAAATACACCAACCGACTAGCTTCAGAACAAAGCCCTTATCTTCTCCAACACGCACATAACCCTGTTGATTGGTTTCCATGGGGCGAAGAAGCTTTCGCCGAAGCACGCCGCCGTGATGCCCCTATCTTCTTATCAATTGGGTACAGCACTTGTCATTGGTGCCATGTTATGGAGGTTGAGTCTTTTGAGGATGAGGGGGTTGCCAAGTTGTTGAATGATTGGTTTGTTAGCATCAAGGTGGATAGAGAGGAGCGACCGGATGTTGATAAGGTATACATGACGTATGTGCAGGCTTTGTATGGTGGAGGAGGTTGGCCTCTAAGTGTGTTTCTTTCACCTGACTTGAAACCTTTAATGGGTGGAACTTACTTTCCCCCTGATGATAAGTATGGACGACCTGGATTTAAGACTATACTTAGAAAGGTAAAAGAGGCTTGGGAAAGTAAGAGGGATATGCTAGTTAAGAGTGGAGCATTTGCAATTGAACAGCTTTCTGAGGCACTGTCTGCTGGTTCAGGTTCTGATAAATTGACTGATGATGTTCCAGAAAATGCATTACATCTATGCTCAGAGCAGCTCTCTGGGAGCTATGATTCAAAGTTTGGTGGGTTTGGATCTGCACCGAAGTTTCCCAGACCAGTTGAGGTCAACTTGATGCTTTACCGCTCCAAAAAGTTGGAGGATACTGGGAAGTTGGATGGAGCTAATGAAGCACAGAAAATGGTTTTCTTTAGCTTGCAATGCATGGCAAAAGGGGGCATTCATGACCATATTGGAGGGGGTTTTCACAGATATAGTGTGGATGAGTGCTGGCATGTTCCACATTTTGAGAAGATGCTATATGATCAAGGGCAGCTTGCTAATGTTTATTTAGATGCTTTTTCTATCACAAAAGATACCCTCTTTTCATGTGTATCACGGGATATCCTTGATTATTTAAGGAGAGACATGATTGGTCCAGAAGGTGAAATCTTTTCAGCAGAGGATGCTGACAGTGCAGAGACTGGAGGAGCTACAAGAAAAAAGGAAGGAGCCTTTTACGTTTGGACCAGCAAAGAGGTTGAAGACATACTTGGAGAGCATGCTGCTCTTTTTGAGGAGCACTATTATATAAAGCAGTCAGGCAACTGTGACCTGTCTGAAACGAGTGATCCTCACAATGAATTCAAGGGAAAGAATGTCCTGATTGAGAGAGAGGATCCTTCAGAAATGGCATCAAAATATGGCATGTCAGTTGAGACATATCATGAAATTCTTGGAGAATGTAGGCGTAAGTTGTTTGAAGTAAGGTCGAGGCGGCCAAGGCCACATTTGGATGATAAGGTTATCGTATCTTGGAATGGACTGGCAATCTCATCTTTTGCTAGGGCTTCTAAGATTCTTAAGGGTGAAGCTGAAGGGACCAAATTCAACTTTCCTGTTGGTGGCACTGAACCAAAGGAGTACATGAAAATTGCAGAAAAAGCAGCATTCTTTATTAGGAAGCAACTCTATGATGAGGAGACTCACAGGCTACACCATAGTTTCAGAAATTTTCCATCTAAAGCTCCTGGTTTCTTGGATGATTATGCTTTTCTGATATCTGGATTGCTGGATCTCTACGAATTTGGTGGTGGAATCCACTGGCTTCTATGGGCCATTGAATTGCAGGAAACCCAGGATGCTTTGTTTCTTGATAGGGATGGAGGTGGATATTTCAATAATGCAGGAGAAGATCCTTCAGTTCTTCTACGTGTGAAGGAAGACCATGATGGGGCAGAACCCTCTGGGAACTCAGTTTCTGCTATAAATCTGATAAGATTGGCTTCCATGGTTTCTGGAAGTAAGGCTGAGCACTATAAGCAAAACGCAGAACATCTATTGGCTGTTTTTGAGAATAGATTGAAAGAAATGGCTATGGCAGTGCCTCTAATGTGTTGTGCAGCAGACATGTTGTGTGTACCTTCCCGGAAGCAAGTGGTCGTGGTTGGTGAAAGGACTTCTGAGGAATTTGAAAGCATGCTTGCCGCAGCTCATGCATTATATGATCCCAACAGAACAGTTATTCATATAGATCCCAACAATAAAGAAGAGATGGAATTTTGGGAAGTAAATAACAGCAATATTGCTCTCATGGCAAAGAATAACTATGCAGTCAACAAGGTTGTGGCTCTTGTATGCCAAAACTTCACTTGTAGCCCCCCTATGACTGATCAATCCGCACTCGAAGCTTTGCTCTCCCAAAAATCATCCTCTTCATCGACATAA 2409 0.4317 MLLQHRWSLGLVHRLFHHHHHHQLLLPRKFQSFSPLKVNKVLSMASSHTHSHNHKYTNRLASEQSPYLLQHAHNPVDWFPWGEEAFAEARRRDAPIFLSIGYSTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLMGGTYFPPDDKYGRPGFKTILRKVKEAWESKRDMLVKSGAFAIEQLSEALSAGSGSDKLTDDVPENALHLCSEQLSGSYDSKFGGFGSAPKFPRPVEVNLMLYRSKKLEDTGKLDGANEAQKMVFFSLQCMAKGGIHDHIGGGFHRYSVDECWHVPHFEKMLYDQGQLANVYLDAFSITKDTLFSCVSRDILDYLRRDMIGPEGEIFSAEDADSAETGGATRKKEGAFYVWTSKEVEDILGEHAALFEEHYYIKQSGNCDLSETSDPHNEFKGKNVLIEREDPSEMASKYGMSVETYHEILGECRRKLFEVRSRRPRPHLDDKVIVSWNGLAISSFARASKILKGEAEGTKFNFPVGGTEPKEYMKIAEKAAFFIRKQLYDEETHRLHHSFRNFPSKAPGFLDDYAFLISGLLDLYEFGGGIHWLLWAIELQETQDALFLDRDGGGYFNNAGEDPSVLLRVKEDHDGAEPSGNSVSAINLIRLASMVSGSKAEHYKQNAEHLLAVFENRLKEMAMAVPLMCCAADMLCVPSRKQVVVVGERTSEEFESMLAAAHALYDPNRTVIHIDPNNKEEMEFWEVNNSNIALMAKNNYAVNKVVALVCQNFTCSPPMTDQSALEALLSQKSSSSST* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03644 802 FunFam spermatogenesis-associated protein 20 55 227 - -
Rops8g03644 802 PIRSF UCP006402_thioredoxin 40 800 IPR024705 -
Rops8g03644 802 SUPERFAMILY Six-hairpin glycosidases 246 640 IPR008928 GO:0005975
Rops8g03644 802 SUPERFAMILY Thioredoxin-like 56 201 IPR036249 -
Rops8g03644 802 Gene3D - 528 704 IPR012341 GO:0005975
Rops8g03644 802 CDD SSP411 79 201 IPR004879 -
Rops8g03644 802 PANTHER SPERMATOGENESIS-ASSOCIATED PROTEIN 20 44 796 IPR024705 -
Rops8g03644 802 FunFam spermatogenesis-associated protein 20 528 705 - -
Rops8g03644 802 Gene3D Glutaredoxin 55 227 - -
Rops8g03644 802 Pfam Protein of unknown function, DUF255 57 217 IPR004879 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03644 - - gmx:100777751 1373.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03644 8 76635168 76645233 Rops8g03644 8 76635168 76645233 ECH