Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03639 ATGAGCAACTCCCAGTTAGGAGATGGGGATGTTGACTCCGCCAATGATTACCAATTTGACCGTGATATATATAAATTAAGTGAGCAACAAGCATGTTTGGATTTTGGAGATTCTTCTTTACGTTGCTCTTTTTGTCAAGCATCTGTTTGGTGTGTATACCTTGGCATTCTCACTCTGCGTTATTGTGGGACACAAACATCGTCGTCTCCGCCGAAGGCACTTAGGGTTGCTCCAATGGAGGATACCCAAGAAATTGAGGAGAAGGCACATGAAGAAGTAATTTCAGACAAAACATCTGAAAAGAAGCAGGAAACTCTGGATGAAATTCTTTCACGGCACAGGAAAGAGATTTCACAGCTGCAGAAAAAGGAAGTTGAAATGAAAAGGGCAGCAGCTAGAGGTAGCAAGGCTGAGCAGAAAGCTAAGAAGAAGCAAGTGGAGGAAGAGGTTTCTCAACTTTCTGCTAAGCTAAAGGAAAAGCATGCCAAAGAATTGGCTGCATTAGGCTATAGCAGTGGTAATGGAAATGGAAATGAAAAGAGCAATTTGGACAGTTTGGTGAAGGCCATAGCTGGAGTATCTGTTACTAGTCAACCTGACCATCCAAAGGTCAGCAAGGCCAAACAGAGGCGAGACAAAAAAGCTCAACAAGAAGCTGAAAGGGAGCAGAGAATCCAAGCAGAGCAGAATGACATTATAAGTGATCGTATGATTGAAGATGAGAAATTGGAAAGGAAGTTGAAGCCTCTTGGTTTGACTGTTTGTGAAATAAAGCCTGATGGGCACTGCCTCTATAGAGCTGTTGAGGATCAGCTGGCCCTCCTCTTTGGGGGTAGATCTCCTTATACATACCAAGAACTTCGAGAAATGGCGGCTGCTTACATGAGAAAGAATACATCTGATTTCCTTCCATTTTTTCTGTCAGAGAATTTGATTGAAGGTGATTCTGATGAATCACCTGCTCAGAAGTTTGAAAATTATTGTAAAGAAGTGGAGTCCACCGCAATATGGGGAGGACAACTAGAGCTTGGTGCCTTGACTCACTGCCTGAAGAAGCATATTATGATATTTTCAGGGTCCTTCCCGGACGTGGAGATGGGGAAGGAGTATAAATCCGATGATGGTATTGGCTCGTCTAATTCAAGTATCATGCTTTCTTACCATAAGCATGCTTTTGGGCTAGGTGAGCATTATAATTCTGTGGTCCCAGCATGA 1215 0.4296 MSNSQLGDGDVDSANDYQFDRDIYKLSEQQACLDFGDSSLRCSFCQASVWCVYLGILTLRYCGTQTSSSPPKALRVAPMEDTQEIEEKAHEEVISDKTSEKKQETLDEILSRHRKEISQLQKKEVEMKRAAARGSKAEQKAKKKQVEEEVSQLSAKLKEKHAKELAALGYSSGNGNGNEKSNLDSLVKAIAGVSVTSQPDHPKVSKAKQRRDKKAQQEAEREQRIQAEQNDIISDRMIEDEKLERKLKPLGLTVCEIKPDGHCLYRAVEDQLALLFGGRSPYTYQELREMAAAYMRKNTSDFLPFFLSENLIEGDSDESPAQKFENYCKEVESTAIWGGQLELGALTHCLKKHIMIFSGSFPDVEMGKEYKSDDGIGSSNSSIMLSYHKHAFGLGEHYNSVVPA* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03639 404 ProSiteProfiles OTU domain profile. 252 404 IPR003323 -
Rops8g03639 404 Pfam OTU-like cysteine protease 258 398 IPR003323 -
Rops8g03639 404 Coils Coil 210 230 - -
Rops8g03639 404 CDD OTU_plant_OTU5-like 243 402 - -
Rops8g03639 404 Gene3D - 238 403 - -
Rops8g03639 404 Coils Coil 103 163 - -
Rops8g03639 404 FunFam Cysteine proteinases superfamily protein 238 403 - -
Rops8g03639 404 SUPERFAMILY Cysteine proteinases 215 403 IPR038765 -
Rops8g03639 404 PANTHER OTU DOMAIN CONTAINING PROTEIN 111 402 - -
Rops8g03639 404 MobiDBLite consensus disorder prediction 203 224 - -
Rops8g03639 404 MobiDBLite consensus disorder prediction 193 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03639 Rops-Chr8 76573270 76586082 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03639 K18342 - gmx:100780620 518.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03639 8 76573270 76586082 Rops8g03639 8 76573270 76586082 ECH