Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03635 ATGGGCAGCGAGTTCAAGACAAGTGAGGATGGAGTCAAGGTGGTGGAGAGAGAGAGGCCTTACGATGTGTTGTTGAGATTTTTGGGGCTTTCACTCACTCTGGTGGCTACCATCATTGTTGGTGTTGACAAGGAGACAAAGATCATCTCCTACGCTGGAATGCAATTCAAAGAAACTGCTAAATGGGAATACATGTCTGCTATTGTATTTTTCTTGGTGTCAAACGCTATAGGATGTTCATATGCAGCTGCTTCTTTGGTCATCTCAGCGATGTCAAGAAGCAGTGGAAATAAAACGACAACGTTGGTGGTAACCATGCTAGACCTTGTAATCATGGCATTGCTGTTCTCAGCCAATGGTGCAGCTTCTGCAGTGGGAGTGATAGCACAGAAGGGGAACTCGCACGTGCAATGGATGAAGGTGTGCAATGTGTTTGAGGGTTACTGTCGCCACATGACTGCTGCATTGGTCCTTTCTCTTATTGGCTCCACCGTCTTTCTTTTGCTGGTGCTGCACACTGTTTTCAAACTTCATTTCAGGTCAAACTAG 549 0.459 MGSEFKTSEDGVKVVERERPYDVLLRFLGLSLTLVATIIVGVDKETKIISYAGMQFKETAKWEYMSAIVFFLVSNAIGCSYAAASLVISAMSRSSGNKTTTLVVTMLDLVIMALLFSANGAASAVGVIAQKGNSHVQWMKVCNVFEGYCRHMTAALVLSLIGSTVFLLLVLHTVFKLHFRSN* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03635 182 Pfam Casparian strip membrane protein domain 21 163 IPR006702 -
Rops8g03635 182 NCBIfam plant integral membrane protein TIGR01569 24 176 IPR006459 -
Rops8g03635 182 PANTHER CASP-LIKE PROTEIN 1U1 16 179 IPR044173 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03635 Rops-Chr8 76500212 76501804 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03635 - - gmx:100817307 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03635 8 76500212 76501804 Rops8g03635 8 76500212 76501804 ECH