Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03628 ATGCAGAAAGAGAAGCAGGCAGTGATAGTGGTAGGAGCAGGCCCTTCTGGCCTCTCTGTTGCTGCATGCTTAACAAAGCACTCTGTTCCTTACATAATACTTGAAAGGGAAGACCGTTTTGCTTCTCTGTGGAACAAATATTCCTATGATCGTCTTCACCTTCATCTCAAAAAGCGGTTTTGCGAGCTTCCTCACAAACCATTTCCACCTTCTTATCCTACATACCTTCCAAAGAAGCAATTCTTGCAGTACCTTGATGACTACGTGTCTCACTTCAGAATCAATCCTCTTTACCACAGAACAGTGGAGGTTGCAGAGTATGATGAGGGTTCTGAGAAATGGAGGGTGAAGGCATTGAATGGGGACTCTGGTGAGGTTGAGGAATATATTGGGAGGTTTTTGGTGGTGGCCACTGGAGAAACCACCGACCCTTTTTTACCTGAGGTGGAAGGATTGAGTAGCTTCCCTGGGAAAGTGCTTCATTCCACTGGGTTTAAGTCTGGGAAGGAGTTCAAAGATGAGCATGTTCTGGTTGTGGGGTCTGGGAATTCTGGCATGGAAATTGCATTAGACCTGGTCAACCATGGTGCCAAAACATCTATTTTGGTTCGAAGCCCGGTTCATTTTCTATCAAGGAAGATGGTGAATTTGGGGTTGTTTCTGATGAAGTATTTGTCGTTGAGGACGGTGGACTCACTGATGGTGATACTTAGCAAGGTGTTTTACGGGGATGTCACAGATTATGGGGTTGCCAGGCCCAATGAAGGTCCCTTTTATATGAAGGTCAAGTACGGCAAGTACCCAGTTATTGATGTTGGAACCTATGAGAAAATCAAGTCTGGAGAGCTGAAGGTTTTGCCAGCAGAAATAGAAAGCGTAAGGGGCAAGGATGTCCTATTCGAGAATGGAGAATTGCACTCATTTGACTCGATTGTTTTCTGCACCGGCTTCAAGAGATCAACTCACAAGTGGCTTAAGGGGGATGATTACCTTCTTAATGATGATGGTCTTCCTAAACCGAGTTACCCCATTCATTGGAAAGGAAGGAATGGTTTATATTGCGTTGGATTATCAAGGAGAGGTTTCTATGGAGCTGCTGCAGATGCTGAAAATATAGCAAAGAATTTAAGTTCCATCATCATGCAACATACCAAAGAAGACCAATGA 1167 0.443 MQKEKQAVIVVGAGPSGLSVAACLTKHSVPYIILEREDRFASLWNKYSYDRLHLHLKKRFCELPHKPFPPSYPTYLPKKQFLQYLDDYVSHFRINPLYHRTVEVAEYDEGSEKWRVKALNGDSGEVEEYIGRFLVVATGETTDPFLPEVEGLSSFPGKVLHSTGFKSGKEFKDEHVLVVGSGNSGMEIALDLVNHGAKTSILVRSPVHFLSRKMVNLGLFLMKYLSLRTVDSLMVILSKVFYGDVTDYGVARPNEGPFYMKVKYGKYPVIDVGTYEKIKSGELKVLPAEIESVRGKDVLFENGELHSFDSIVFCTGFKRSTHKWLKGDDYLLNDDGLPKPSYPIHWKGRNGLYCVGLSRRGFYGAAADAENIAKNLSSIIMQHTKEDQ* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03628 388 Pfam Pyridine nucleotide-disulphide oxidoreductase 9 206 - -
Rops8g03628 388 Gene3D - 1 382 IPR036188 -
Rops8g03628 388 SUPERFAMILY FAD/NAD(P)-binding domain 173 380 IPR036188 -
Rops8g03628 388 PRINTS FAD-dependent pyridine nucleotide reductase signature 8 27 - -
Rops8g03628 388 PRINTS FAD-dependent pyridine nucleotide reductase signature 175 193 - -
Rops8g03628 388 SUPERFAMILY FAD/NAD(P)-binding domain 5 270 IPR036188 -
Rops8g03628 388 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Rops8g03628 388 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 7 381 - -
Rops8g03628 388 PIRSF FMO 3 365 IPR000960 GO:0050660|GO:0050661
Rops8g03628 388 PRINTS Pyridine nucleotide disulphide reductase class-II signature 7 29 - -
Rops8g03628 388 PRINTS Pyridine nucleotide disulphide reductase class-II signature 171 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03628 Rops-Chr8 76377212 76380407 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03628 K11816 - gmx:102668138 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03628 8 76377212 76380407 Rops8g03628 8 76377212 76380407 ECH