Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03624 ATGGCTGAGGCCTACGCCTCTTGTTCATCGCCACCTGCTGGAGAGAAAGTCAAAGATGCAAGAGAAGATGAAAAGTTTCAGGAAACTGAGCTCTTTGAGGATACCTTGGTGCTCAATATTCCCTTTACTGAAACTGAGGTGCAAAATATCCATCTGAATACTGAGGTTGTAGATGATTCAGCACCTATGGAGAACATGACAGCCGGTCCAATATGTGAATATGAACAAGAAGTAGTGCTTGATAGTGAGGATGAAGAAATGAATAATACAGGTGCCATAAATGTTGCCAAAGGATTTCTTGAGAATGAAACTGGTCCAACAGTGAAAAATCTTTCTATGCTCTTCCAGAAGAGACTGCCTAAGCCACCTTATGAGCTAGCAGACTCAAATGCCACTACCTTTGGGAAATCTGCTACCGGGGACAAGGTAGCTTCAATTGATGCTGAGAGCTTTGATGATAACAACCATCTAGATCCACCTACAAGGTTAAATTCAATTCGCTCACCAGAACCTGTGGATTCAACCCAAGCTGCACTGGGCTTTGTGGATCAGTACTTGTCATCGGACAATGTGGACTTGTTTCAAGGATTTCATCATAGAAAGATCGCTAGGGAGAAATCACCTCATGTCCTGAGTGCAAGAGGACCACTAAGTCTGGCTAAGAAAATTAAAGCTCGAACTCGTAACGTAGAAAAAGAACCCTTCAAATGGGTGGACAGTGATCAAAATGACAAAGAAGTTGGTAGCTTTTGTAAAACAATTGAAACATCTTCAAATTTTAGAAGCTACAAACAGACATATATGAGAAAAAGACAAAAAAAAGGTGGCCATCTTCAGAACCAAGGAAACTGTAGTACAGATAAGAGATGTGATGAAAAGTTAGTCCAAGGACCAAGGATGGCAACTATAAGTAATCACTCTCTCAAGGAGCTGGATGTTCAGTCAGGTGCTACTAGAGAGAATGTGAATGTTTATTCCCGTGTGGCACATACAGAAGACATATATGATATTGGTTTAGACACTCAAATCGCTGCTGAAGCTATGGATGCCTTGGCCTTTGTGTCCCCTCCTGGCTGCCATTTCAATGATGCTCACCAACCAGAGATTGTATTAGACGGCTCTTTGAACAATTTGAATGAAGCTCATCAGAAAAGTTCTTCGCATAGACAGAATTCTGGTTTACATTCTATCACACTAAAATCAAATAAGAGAAAAGTATCTTCCTGTAGATTTAGTAAGGTAACTTCTAGTTCCTCTTGCAAGCATACTGACAATCAGGAGTCAAATCCTATCTCAAGGGAAACGAAAAAAATGATGAAAGGCAAGTCAACTGTTGAGGGACAGTTCGAAAATAATACTAGTTCGCCAATATGCAGTGAACATGTGTCACGTGAAGAGGTTTGCTCACCAGGAGAGTGTATAAGTTTTCAACCTGCTGCCAAAGAACCCAAAAATGGGAATAACGAGAGCAGATGGACAAGTATCAAAGATCAACCAAGCCATCATACAGAGAGGAACAATGATGTCAAGAAGAGTATTGTTAAACACAAGAGGAAGAGGAATGGTTTAGTGGCTGATCCAGTGAAGTTGGATGTTAAAACAAAATGTCTTAAATTGCCTACAAATTCATGTGGGGTGGCTAGGAAGAGCACGTTGAATCATCAGGTTCAAGTTGGTCCACGGCTATCTGCTACCAGCTGTTTTTCAAGGATTGATTTATGGGTTTATCCAAAAAGATCAAGAGGGAAAAGAAAGCGGGCTAATGTGCAAATCAATCTTGATGCACCAAGAGTTTTGTCTATTGATGGAAAAGAAAGCAATGCCTCCTCCACTAGAAGTCTAGAATGCCAAGATGATGTGGATAAACCGTGTTCTCCTCACACCTGTCCACCTTGCAGTGCTTCATGTATTGATAATGGCAGGTGCTTGTTACAGGGAAACTCTATTCAACCTGGTTCAGCTGGTGATGCCATGAAGTTCGAAAACCTGCATGACAAGCATCCTTTATTAGTGGGACATGTTGAAATATCATCGAACAAGAACGTTGCACAATCAAGTTCAGAAATTTCAGCTACAGTCGCTTCAAGTGAAAGCATAAAGATTTCAAATGCTAACCATACATACAATGAGCATCACAAAAAGCCATGTAACAAAAACCTTCCACAGACTTCGCTTTTAAAGGAACTTATCAGATTAGGAGTTCCTGAGTCCACATCAGATATTATATGGAAAGATTTGCGAAAGAAGAGAGATATGACATATGTTCGAGTTCTATTTAGCCAACATTTGGATGACAGTGTCATCAAGCAACAAAAAAAGATCTTGGCACGTCTCAATGTATCTATTGCATCAAGCTCAATGGAGGCCACACATTTTGTAGCAGACAAATTTACACGTACAAAGAATATGTTGGAAGCAATGGCTCTTGGGAAATTAGTGGTGACACATTTATGGCTTGAGAGCTGCGGACAAGCCAACTGTTATATTGATGAGAAAAATTACATCCTGAGGGATATGAAAAAGGAAAAGGAAATAGGCTTTAGCATGCCTGTTTCTCTTAGTCGAGCAAGACAGACGCCACTCTTGAAGGGTAAAAGAGTCTACATCACACCACACATTAAACCTGATAAGGAAGTGGTTGCAAGCTTGGTCAGAGCTGTTCATGGCCAGGTAGTGGATGAAAGTCAGATATGTGCAGACAAGAATGATAATATCTTGGATGGTCTGCTGATTCTTTCTTGTGAAGATGACTATGCAATGTGCCACCATTTCCTTACAAAAGGAGCTGCTGTTTACAGTTCAGAGCTTGTTCTGAATGGAATTGTAATCCAGAAATTGGAACTCGACAGACATCAACTTTTCATGAATCAAGTTACAAGGAATAACCCAAGTACGTCTAATCGGTTTGGGAAGGTTTACAGAAGGCGTAGGTCATTGAGGCCTTTATCTGGACCATAG 2958 0.4064 MAEAYASCSSPPAGEKVKDAREDEKFQETELFEDTLVLNIPFTETEVQNIHLNTEVVDDSAPMENMTAGPICEYEQEVVLDSEDEEMNNTGAINVAKGFLENETGPTVKNLSMLFQKRLPKPPYELADSNATTFGKSATGDKVASIDAESFDDNNHLDPPTRLNSIRSPEPVDSTQAALGFVDQYLSSDNVDLFQGFHHRKIAREKSPHVLSARGPLSLAKKIKARTRNVEKEPFKWVDSDQNDKEVGSFCKTIETSSNFRSYKQTYMRKRQKKGGHLQNQGNCSTDKRCDEKLVQGPRMATISNHSLKELDVQSGATRENVNVYSRVAHTEDIYDIGLDTQIAAEAMDALAFVSPPGCHFNDAHQPEIVLDGSLNNLNEAHQKSSSHRQNSGLHSITLKSNKRKVSSCRFSKVTSSSSCKHTDNQESNPISRETKKMMKGKSTVEGQFENNTSSPICSEHVSREEVCSPGECISFQPAAKEPKNGNNESRWTSIKDQPSHHTERNNDVKKSIVKHKRKRNGLVADPVKLDVKTKCLKLPTNSCGVARKSTLNHQVQVGPRLSATSCFSRIDLWVYPKRSRGKRKRANVQINLDAPRVLSIDGKESNASSTRSLECQDDVDKPCSPHTCPPCSASCIDNGRCLLQGNSIQPGSAGDAMKFENLHDKHPLLVGHVEISSNKNVAQSSSEISATVASSESIKISNANHTYNEHHKKPCNKNLPQTSLLKELIRLGVPESTSDIIWKDLRKKRDMTYVRVLFSQHLDDSVIKQQKKILARLNVSIASSSMEATHFVADKFTRTKNMLEAMALGKLVVTHLWLESCGQANCYIDEKNYILRDMKKEKEIGFSMPVSLSRARQTPLLKGKRVYITPHIKPDKEVVASLVRAVHGQVVDESQICADKNDNILDGLLILSCEDDYAMCHHFLTKGAAVYSSELVLNGIVIQKLELDRHQLFMNQVTRNNPSTSNRFGKVYRRRRSLRPLSGP* 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03624 985 MobiDBLite consensus disorder prediction 478 518 - -
Rops8g03624 985 MobiDBLite consensus disorder prediction 381 401 - -
Rops8g03624 985 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 130 953 - -
Rops8g03624 985 SUPERFAMILY BRCT domain 753 853 IPR036420 -
Rops8g03624 985 MobiDBLite consensus disorder prediction 1 22 - -
Rops8g03624 985 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 748 836 IPR001357 -
Rops8g03624 985 MobiDBLite consensus disorder prediction 150 171 - -
Rops8g03624 985 MobiDBLite consensus disorder prediction 157 171 - -
Rops8g03624 985 MobiDBLite consensus disorder prediction 495 511 - -
Rops8g03624 985 ProSiteProfiles BRCT domain profile. 776 836 IPR001357 -
Rops8g03624 985 MobiDBLite consensus disorder prediction 416 439 - -
Rops8g03624 985 CDD BRCT_MDC1_rpt1 755 829 - -
Rops8g03624 985 Gene3D BRCT domain 860 961 IPR036420 -
Rops8g03624 985 CDD BRCT_PAXIP1_rpt6_like 861 947 - -
Rops8g03624 985 Gene3D BRCT domain 743 859 IPR036420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03624 Rops-Chr8 76341059 76345449 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03624 K14972 - gmx:102659913 1379.77