Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03618 ATGATGCTCAGAATTCGAAGCCGTGACGGCCTTGAACGAGTAACCGTCGACAACCCTAACGGCACAACGGTTTCTGAACTGAAAAGAATAATCGAGAAACAGCTAGGAATCCCAACCCATAACCAAACCATCTCAACCAACCAGAACCTTTTACTGGCTAAGTCGGTGGAAGATCTACACCGATTCACCGATATGTCGAACCCGGATACACCAATTTCGGGTCTTAACCTCTCTCACGGGTCAATCGTGTTCTTAGCCTACGACGGTGAACGCAGGGTGGCGGGACCCACCTTCAACCCCGCCGGTTCATTCGGTCGCAAGATGACGATGGACGATCTCATCGCGAAACAGATGCGGGTGAGCCGACAGGAGAATCCGCATTGCGAGCTTGTTTCCTTCGATCGCGATTGCGCCAACGCGTTTCAGAACTATGTCAACGAAACGCTGGCGTTTGCTGTGAAACGTGGAGGGTTCATGTACGGCACCGTTTCGGAGGAAGGTAAGGTTGAGGTGGATTTCATATACGAGCCACCCCAACAGGGTACGGAGGAAAATTTGGTCTTTTTCAGGGACCCAGAGGAGGAAAAATTGGTGGAAGCTATTGCGTTGGGGTTGGGGATGAGAAGGGTTGGGTTTATTTTCACGCAGACGGTGAGTCAGGATAAAAAGGATTATACTTTGTCGAATAGGGAGGTGCTTCAGGCTGCTGAGTATCATGCTGAGAGTGGGTTGAAGGAGTGGGTCACTGCTGTGGTGAAGCTTGAGGTGAATGAGGATATGGGTGCTGATGTTCATTTTGAAGCCTTTCAGATGAGTGATGTGTGTATTCGTTTGTTCAAGGAAGGTTGGTTTGATACTGATATTGAGGAGGATTATGATCCTAAGTTGTCTAAGATGAAGAAGGATGTTGTTGTTGGGGTTAAGGATACTAGAGAGGTTGATAATGATTTCTTCTTGGTCGTCGTCAAAATCTTTGATCATCAGGGTCCTCTCTCATCATCATTTCCGATTGAGAACCGGAATACTCAAGTGACTATGAAGGCACTGAAGAATCATCTAGAACGGACAAAAAGTCTTCCATTTGTAAAGCGAATTTCTGATTTTCATCTTCTTCTCGTTTTAGCAAGGGTTCTAGACCTGAATGCTGATGTTCCTGCCTTGACAGAATGTGTGCAGACACAGACTGCTGTACCAGAAGGTTACCAGATCCTTATTGAGTCCATGGCTAGCACTGCTTGA 1239 0.4705 MMLRIRSRDGLERVTVDNPNGTTVSELKRIIEKQLGIPTHNQTISTNQNLLLAKSVEDLHRFTDMSNPDTPISGLNLSHGSIVFLAYDGERRVAGPTFNPAGSFGRKMTMDDLIAKQMRVSRQENPHCELVSFDRDCANAFQNYVNETLAFAVKRGGFMYGTVSEEGKVEVDFIYEPPQQGTEENLVFFRDPEEEKLVEAIALGLGMRRVGFIFTQTVSQDKKDYTLSNREVLQAAEYHAESGLKEWVTAVVKLEVNEDMGADVHFEAFQMSDVCIRLFKEGWFDTDIEEDYDPKLSKMKKDVVVGVKDTREVDNDFFLVVVKIFDHQGPLSSSFPIENRNTQVTMKALKNHLERTKSLPFVKRISDFHLLLVLARVLDLNADVPALTECVQTQTAVPEGYQILIESMASTA* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03618 412 FunFam NPL4-like protein 1 1 100 - -
Rops8g03618 412 ProSiteProfiles Ubiquitin domain profile. 1 51 IPR000626 GO:0005515
Rops8g03618 412 Pfam NPL4 family 157 281 IPR007717 -
Rops8g03618 412 Gene3D - 1 100 - -
Rops8g03618 412 CDD Ubl_AtNPL4_like 1 85 - -
Rops8g03618 412 Pfam Nuclear pore localisation protein NPL4 1 51 IPR024682 -
Rops8g03618 412 Gene3D Cytidine Deaminase, domain 2 137 311 - -
Rops8g03618 412 PANTHER NUCLEAR PROTEIN LOCALIZATION 4 1 88 IPR016563 GO:0006511
Rops8g03618 412 SUPERFAMILY Ubiquitin-like 1 89 IPR029071 -
Rops8g03618 412 CDD MPN_NPL4 119 374 IPR007717 -
Rops8g03618 412 ProSiteProfiles MPN domain profile. 130 271 IPR037518 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03618 K14015 - gmx:100811623 734.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03618 8 76282907 76287077 Rops8g03618 8 76282907 76287077 ECH