Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03590 ATGGCGAAACCCATAAACGTTTTCAGTGCAAAGCCCTCACCTTTAAGCACTTGGGTAGTGATTTTAATCCTCTGCATTCTGGGTTTCTACGCTTTGCATTACCCTCACTCTTCTTCAGCTTCTTCCACTGCCCAAAACGCTTCCCACTTCCAAAATCTCTTCCTTTCTTCTTCTTCCAACTCCACCATCTCTTCCTACCTCCGCTCCCTCACCCTGCACCCTCACCTCGCTGGAACAAAACCCGCCGCCGACACAACACGCTACGTCCTCAACCACTTCACTTCCTTAGGCCTCAAAACCCACACAACAACCTACAATGCTCTTCTCTCATACCCTGTTCGTTCTTCACTCTCTGCGCATTTTAGCGACGGTTCCTCCGTCGAACTTCCACTCACTGAACCGGCCGGACCGGGAGTTGTGCCGCCTTACCACGCGTACTCTCCGTCCGGTTCGGTTTACGCTAAGGCGGTGTTCGTTAACTATGGAAGAGAGAAGGACTATCGTGCGCTTGGGGTGAACGTTAGTGGGTGCATAGTGATAGTGAGAAAAGGTGGGAACTTGGGGAGGGGTGCGGTGGTTGAAGTGGCGGAGGCTAATGGGGCGGCGGCGGTGTTGATTTACGGCGATGGTGACACGTGGAGGAATGGGTTTGAGAGGGGACATGTGATGAGGGGTATTGGGGACCCACTTAGTCCTGGTTGGGGTAGTGTGGATGGTGGTGAGAGTTTGGGTTTGGAACATAGTGAGGTTTTGAAAAGGTTTCCTAAAATTCCATCCATGCCCCTTTCTGCTCATATTGCTGACTCCATTTTGTCCTCTCTTGGAGGTTCTCAGTTGCCCCTAGAATGGAGGAGCAACCTTCACTCTAAGGTCACTCATGTTGGTCCTGGCCCCACAATGCTCAATTTCACCTACCAGGGTGAAAAGAAGGTGGCAACCATTCAAAATGTTTTTGCCGTCATAAAGGGATCGGAAGAATCTGATCGCCATGTTCTGCTTGGGAACCATAGAGATGCATGGACATATGGTGCTGTAGATCCCAGTAGTGGGACAGCTGCCCTACTTGACATTGCTCGTCGATTTTCTATTCTATTGGGTTCGGGGTGGAAGCCAAGGAGGACAATAGTTCTCTGCAGTTGGGATGCAGAGGAATTTGGAATGATAGGATCCACTGAGTGGGTTGAACAAAACCTTATCAATCTGGGTTCCAAAACTGTTGCATACCTTAATGTGGACTGCGCCGTTCAAGGCCCTGGTTTCTTTGTTGGCTCAACTCCTCAGCTAGACAATCTTATTCTTGAGGTCACAAAAAAGGTCAAGGATCCTGACTCTGAGGGCGTATCACTATATGAGAATTGGGCTGCTGGTGGTGGAGGCAATAATATTCAGAGGCTCAGTGGAGTCGATTCTGATTTTGCTCCATTCGTGCAACATGCAGGGGTTCCATCTGTTGATGTGTATTATGGAAGAGATTTTCCTGTCTATCACACTGCTTTCGACTCCTATAACTGGATGGCAGAGTATGGAGATCCATTTTTCCAGCGCCATGTTGCTGTTACTGGAGTTTGGGGGCTTCTAGCCCTTCACCTTGCTGATGATTCCATTCTTCCTTTCAATTACGTTTCATATGCAAATGAGTTACAGTTGTACAAGAACATATTGAGCAACTTGTTAGACCAGAAAATTTCTCTGCATCCGTTAACTGTGTCAATTCAAGAATTTGCTTCTGCTGCCAAAGAAGCTGATGATGAACTAAAGAAACTGAGATCGCAAGAAACTCCAGGTTGTTTTGTAGATATGAAAAAGCGAGCATTGAATGATAGACTAATGCTTGCTGAAAAAGGCTTCCTGGATGCAGATGGACTTCCAGGAAGGCAGTGGTTCAAGCATCTTGTGTTTGGGCCTTCCAATAACCATGAAAAACTGGATTTCTTCCCCGGAATTGCTGATTCTATCACTCGGTCAACAGGCATAAGTGAAGAAGAAAGGGTGGCAGCAATTCAACATGAGATATGGAGGGTTGCCAGAGCCATTCATAGAGCTGCTTTTGCACTCAGAGGAGAATTCACCTAA 2073 0.4752 MAKPINVFSAKPSPLSTWVVILILCILGFYALHYPHSSSASSTAQNASHFQNLFLSSSSNSTISSYLRSLTLHPHLAGTKPAADTTRYVLNHFTSLGLKTHTTTYNALLSYPVRSSLSAHFSDGSSVELPLTEPAGPGVVPPYHAYSPSGSVYAKAVFVNYGREKDYRALGVNVSGCIVIVRKGGNLGRGAVVEVAEANGAAAVLIYGDGDTWRNGFERGHVMRGIGDPLSPGWGSVDGGESLGLEHSEVLKRFPKIPSMPLSAHIADSILSSLGGSQLPLEWRSNLHSKVTHVGPGPTMLNFTYQGEKKVATIQNVFAVIKGSEESDRHVLLGNHRDAWTYGAVDPSSGTAALLDIARRFSILLGSGWKPRRTIVLCSWDAEEFGMIGSTEWVEQNLINLGSKTVAYLNVDCAVQGPGFFVGSTPQLDNLILEVTKKVKDPDSEGVSLYENWAAGGGGNNIQRLSGVDSDFAPFVQHAGVPSVDVYYGRDFPVYHTAFDSYNWMAEYGDPFFQRHVAVTGVWGLLALHLADDSILPFNYVSYANELQLYKNILSNLLDQKISLHPLTVSIQEFASAAKEADDELKKLRSQETPGCFVDMKKRALNDRLMLAEKGFLDADGLPGRQWFKHLVFGPSNNHEKLDFFPGIADSITRSTGISEEERVAAIQHEIWRVARAIHRAAFALRGEFT* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03590 690 Pfam Peptidase family M28 316 503 IPR007484 -
Rops8g03590 690 FunFam Os01g0740650 protein 307 537 - -
Rops8g03590 690 SUPERFAMILY Zn-dependent exopeptidases 61 535 - -
Rops8g03590 690 Gene3D Zn peptidases 61 537 - -
Rops8g03590 690 SUPERFAMILY Transferrin receptor-like dimerisation domain 537 688 IPR036757 -
Rops8g03590 690 Gene3D - 115 307 - -
Rops8g03590 690 FunFam N-acetylated-alpha-linked acidic dipeptidase 2 538 688 - -
Rops8g03590 690 SUPERFAMILY PA domain 108 318 IPR046450 -
Rops8g03590 690 Gene3D - 540 690 IPR036757 -
Rops8g03590 690 Pfam Transferrin receptor-like dimerisation domain 562 685 IPR007365 -
Rops8g03590 690 Pfam PA domain 154 215 IPR003137 -
Rops8g03590 690 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 16 687 IPR039373 -
Rops8g03590 690 CDD M28_PSMA_like 312 538 - -
Rops8g03590 690 Coils Coil 571 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03590 Rops-Chr8 76038038 76044216 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03590 K01301 - gmx:100798131 1176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03590 8 76038038 76044216 Rops8g03590 8 76038038 76044216 ECH