Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03576 ATGGAATCTGAAAATGAGGTTGCTGTGGAGGAAGAGAAACGTGTTATTGGGGTAACAACTAAGGAGAATATAAAGAAAGAAGTTGAAAACAATGGTAGTAGTGCAGAAATTCCTACCAAGAATGAAGTTTCTGAACCCAAAGTGGAGGCTGAAGGCGTTGAAGCCTCTAAAACTTCTTCTGCAAGTAAAAATTCAAAACGTGCAAAGGAACCTGGTGGCAGAACAAGTGTTGTTTCCAAGAACAACAAATCTGTCAAAGAGAAACCAGTTTTGAAGGGCCCAACTTCAATATCTCAAAAACAAATGCCAGCCCTTACTCAGAGCTTATCTTTCCCAGCCAAATCAGGTCGTGAAGATGCTATGCAGAAAAGTATTGATGGGTTTCTTGTGAAGACTAAAGTTAAACATGTTCAAGGTAATGAGGTTAGAGCTGAGGCTTCCATTCGTGGACATTCAAGCAAGTCCACCAATTCTGAAGTGAACTCAAAGGAGGCAAAAACAAGCACCAGAGGTTCTAACCAGAAGACTTCTTTGACATCAATACATGGTTTGAAACGCTCTGTGTTTGGAAGGTCTACTTCAATTATTGCAGTCACCAAGAACCATACATCTGAGGAATCAGTACTCGTTGATCGGATTACAAATCCGGCAAAAACTGCAAAACCAAATAAAGAAGATGATGATTCACATTCCACAACTTCAAGTGTTACTCCTAGTCAGAGAAACAGTGGTTCTGGATTTTCCTTCAGATTGGAAGAAAGAGCTGAAAAGCGGAAGGAGTTTTTCTCAAAGTTGGAGGAAAAAATTCTAGCCAAGGAAGCAGAGAAAACTAACCAACAAGCGAAATCAAAGGAAAACCAAGAGGCTGAGATCAAGCAATTGAGGAAGAGCATGACATTCAAAGCCACTCCAATGCCAAGTTTCTATAAGGAACCACCACCAAACGTTGAGCTGAAGAAGATACCAACAACCCGTGCAAGATCCCCAAATCTTGGAAGGCACAAAGCATCTGCTATGAACAACAATTCAGAAGAAGACAAGTCTTGCTCCAGTCCATGTGGTAAACAACTGCAGAATGATTCTACCAAGGCAAAGGTAAAGGGTCATAAGGATGTGATTTCAAAGAAACCAATCAGGAAAACCCAAGCCAAACTGAAGTTTCAGGAAAATGCAACCACAGAAAGCAAAGAAGAATGCCAGCAGGCGCATGCTAACAATTCTGAATGCAAAAATGACATGGAGCTACAATCTGAAACAGATCATGCTCCAAATAATGCACTGCTTTTAAATTCAACTACACCTGAGCTTGTATCATATGAGGTTACTGTTGGAGTGTAG 1338 0.4066 MESENEVAVEEEKRVIGVTTKENIKKEVENNGSSAEIPTKNEVSEPKVEAEGVEASKTSSASKNSKRAKEPGGRTSVVSKNNKSVKEKPVLKGPTSISQKQMPALTQSLSFPAKSGREDAMQKSIDGFLVKTKVKHVQGNEVRAEASIRGHSSKSTNSEVNSKEAKTSTRGSNQKTSLTSIHGLKRSVFGRSTSIIAVTKNHTSEESVLVDRITNPAKTAKPNKEDDDSHSTTSSVTPSQRNSGSGFSFRLEERAEKRKEFFSKLEEKILAKEAEKTNQQAKSKENQEAEIKQLRKSMTFKATPMPSFYKEPPPNVELKKIPTTRARSPNLGRHKASAMNNNSEEDKSCSSPCGKQLQNDSTKAKVKGHKDVISKKPIRKTQAKLKFQENATTESKEECQQAHANNSECKNDMELQSETDHAPNNALLLNSTTPELVSYEVTVGV* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03576 445 PANTHER PROTEIN WVD2-LIKE 4 56 438 IPR044833 GO:0008017
Rops8g03576 445 MobiDBLite consensus disorder prediction 334 361 - -
Rops8g03576 445 MobiDBLite consensus disorder prediction 232 247 - -
Rops8g03576 445 MobiDBLite consensus disorder prediction 200 251 - -
Rops8g03576 445 MobiDBLite consensus disorder prediction 149 183 - -
Rops8g03576 445 Coils Coil 262 297 - -
Rops8g03576 445 MobiDBLite consensus disorder prediction 19 104 - -
Rops8g03576 445 Pfam Targeting protein for Xklp2 (TPX2) domain 247 315 IPR027329 -
Rops8g03576 445 MobiDBLite consensus disorder prediction 298 430 - -
Rops8g03576 445 MobiDBLite consensus disorder prediction 141 183 - -
Rops8g03576 445 MobiDBLite consensus disorder prediction 385 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03576 Rops-Chr8 75817925 75821238 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03576 - - gmx:100794426 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03576 8 75817925 75821238 Rops6g00756 6 19381824 19385798 PCT