Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03561 ATGGATCCGGCGAGGACGCCACTGGGGCAAATGCTACTGGATGAGATCACTCCCGTTGTGATGGTCCTTTCTACTCCTTCCGTCGAAGATTCTTGCCTCAAAAATGGCCTCTCCTTCCTCCAAATGCTCTCTCCATTTTGTTCCTTCAACAACATCGACGTTCCTGTAAGAACCGCCAGTGACCAACCCTATCGTCTTCACAAGTTCAAACTCCGCTTGTTCTATGCTTCCGACGTACGCAAGCCCGATTTTAAGGTAGCTAAAGAGCAATTGAAGCAAGTTATCACTGATGCGGGGGAGAAAGTGTTTCCGGAGTTGTGTTCAGATGTGCCAGAAAATATTCATGAACTTCCGAGTTCTGAATACAGAAATACACCATCGTGGTTTCAGTTTTTCAATAAAGAGCTTGTCCGTATGGCTTCCTTTTCAGACCATGAAGCTTTTGATCATCCTGTGGCTTGTCTTCTAGCTGTTTCTTCAAAGGATGAACACCCTATTAACACATTTGTTGACCTTTTCAATACCAACAAGCTTCCTTCCCTTCTTAATGATGGTGCAATGGATCCAAAGGTTTCAAAGCACTACTTGTTAGTGCATGATAATCAAGATGGCCCTGCAGACAGAGCAAGTAAAATATTGACAGAAATGAGGAGTACATTTGGTACAAGTGACTGTTTGTTGCTTTGCATTAATACTGCACAAGATGCTCCAATCAACCATCAAGTTAATCCTTGGGCTTCCTATATATTTGATGCCTTACCTAGTCAAGATCTTGGTTGCTTTCTTAACATTGATGATATCGATGAGATCAAAGATTTAATGCAAGATTTATCATCTAAGCACATCATTCCAAACATGGAGCAAAAAATTCGTGTGCTCAATCAACAGGTTTCTGCAACACGAAAAGGTTTTAGAAACCAAATAAAAAATCTATGGTGGAGAAAAGGGAAAGAAGATGGTGCAGATTCTCCCAATGGTCCTACGTATAACTTTAACTCCATTGAATCCCAGATTCGAGTTTTGGGTGACTATGCTTTCATGTTACGAGATTATGAACTAGCCTTGTCAAATTATCGCCTAATTTCCACAGATTACAAGATTGATAAAGCCTGGAAGTGTTATGCTGGTGTGCAGGAAATGATGGGACTTACATACTTCATGTCGGATCAATCAAGAAAAGAAGCCGAGTATTGCATGGAAAATGCTTTTAACACATATTTAAAACTTGGATCATTGGGTCAGCAAAATGCTACACGATGTGGTCTGTGGTGGATAGAAATGTTGAAGGCACGAGATCTATATAAGGAGGCGGCAACTGTTTATTTTCGTATTTGTGGTGAGGATATCCTACATTCTGCTGTGATGCTTGAACAAGCATCATACTGCTACTTCTTGTCCAAACCCTCCATGTTACGCAAATATGGATTTCATCTAGTGCTTTCTGGTGAGCAGTATAAAAAGTGTGATCAGATCAAACACGCGATTCGAACGTATGGAAGTGCTCTATCTGTTTTCAAAGGAACTACTTGGAGTTATATCAATGATCACGTTCATTTCCATATAGGACAGTGGTATGCTTCTCTTGGGATGTTTGATGTGGCTGTCAAGCATATGACAGAAATCTTGGCCTGTAGTCACCAGTCCAAAACAAGGCAGGAATTATTCCTGAGTGACTTTCTTCAGATTGTGGAGAAAACAGGACAGACTTATGAGGTAACAAAACTTCAATTGCCTGTGATCAACATCTCTTCGCTCAAGGTCACCTTTGAAGATCACCGAACTTTTGGATCACCTTCAGCTGCTAACACTAGAGAAGGCTTGTGGCGTTCTTTGGAGGAAGAAATGATATCATCATTCTCTGCTGCCAAGACTAATTGGTTGGAGTTGCAATCAAAGCTTATCTCAAAAAAGCAGAGTCAATCAAATGTTTGTGTTGTAGGAGAAGCCGTGAAGGTCAATATCGAATTCAAAAACCCTCTGCAAATCTCAATTCCCATATCTGGTGTTACACTTATATGCAAATATTCTGCTAATAATGATGAACATACATCAGATGAAAATGTATCAAGTGTGGAGACTGATAATGAAGTTGACCACTTCAGGGATATGAGCTCAGACAATTCCTCATTCGTGGTGTCTGAGGTTGATTTCTTGCTAGGAGATGGTGAAACAATCACGGTTCAACTATCAGTTACTCCCAAGGCAGTAGGTACTCTTGAAATTCTTGGTGTTCGATGGAAACTGTCAGGTACCATTGTTGGCTTTCACAACTTTGAGTTGAGCCACCCAAAGAAGAATATTGTAAATGGAAGGAGGAAAGCAAAGAACTCCCCTAATGAGAAATTTAAATTTATGGTGATCAAGAGCATACCCAAGCTTCAGGGTTCCATTCACTCCTTACCTGGAAAGGCATACGCTGGAGATTTACGGCAACTTGTGCTGGAGTTGAGGAATCCATCAGAGTTTCCTGTCAAGAATCTGAAGATGAAGATAAGTCATCCTAGATTCCTGATTATTGGGAATCAAGAAAATATGAAGTCAGAGTTTCCTGCTTGCTTAACAAAGAAGATAGATTCAGTGCAAAGTGATGCACATGCTTATCATAATATCTTGTCTGACACTGTCTTTTTGTTTCCAGAGGGCACATCAGTTCAAGGTGAAACACCCTTCTTGTGGCCTCTTTGGTTTAGGGCTGCTGTTCCAGGTGATATTTCTCTTTACATGAGCATATATTATGAGATGGGAGATGTATCAAGTGTCATTAGATATCGCACTCTTCGCTTGCATTACAATGTGCAGGTATTACCATCATTGGATGTCTCGTTTCAAATCAATCCTTCTCGATCAAGAATACAAGAATTTCTTGTTCGTTTGGATGTTGTTAACAAGACAAGCTCTGAAAGTTTCCAAGTTTATCAGTTGTCATCTATTGGGCATCACTGGGAAATCTCATTACTTCAACCTCCTGATACTATTTTTCCTTCGCAAACGTTGATGGCTGGTCAAGCAATATCATGTTTCTTCACACTTAAGAACTCAAGAAAATTGTCGACATTGGAGGACAACATATCTACCATGCCTGTCAGAAGTGATGTAAGATTGATTCCCCAAAGTAATGAGGATTTAGTTTATGATACAAATAGTGTACCTTTGGTCAGTTTCCACCATTATGAAAGATTGCAGCAGGAAGTGTCACAGGAGGATCTGCGGGAATCAAATACTGTTGATTTTGTATTGATCTCTCGGCTACTCAAGAGTAACAACAATCCTGGTTTATCTGATCCTCCTCATGTTATGTCTCATCATGCATGTCACTTAAGTACTGCTAGCACGGGCCCCATTTCATGGCTAATGGATGGACCTCTAACCTTGCATCATGACTTCTCTGCATCCTTCTGTGAAATAAATCTGAAGATGTATCTTTACAATTCATCTGGAGCCACTGCTTTTGTGCGCATTGAAACCTTAGATTCTGCTGGTAATGGTGGACATATGAACAGCGTAAATGTGGTTCAATCAGCTACTCCTGATAACCAAGTAGGGTGGCATGATGTCACACCAGTGAATGAACTCAAAGTAACATCAAATGTTCTTGAAACACAACCAGGAAAGGCCCTATCATTGGAAAGTGTCTCCCCGTACATTTGGTCTGGATCAAGCTCGACCAATCTCCACCTTAAGCCTATGTCCTCGGCAGAAATTCCTCTTCAGATCTGCGTGTTCTCTCCGGGGACATATGACCTGTCAAATTATGTGTTGCATTGGAATCTTCAATCCGAAGGTCAGGGAGACAGTGATGAAACGAGACATCATTCAGGCAAGTGCCAGGGCTATAAATACTATCTTACTGTGCTCCAATCCACTTGA 3867 0.4086 MDPARTPLGQMLLDEITPVVMVLSTPSVEDSCLKNGLSFLQMLSPFCSFNNIDVPVRTASDQPYRLHKFKLRLFYASDVRKPDFKVAKEQLKQVITDAGEKVFPELCSDVPENIHELPSSEYRNTPSWFQFFNKELVRMASFSDHEAFDHPVACLLAVSSKDEHPINTFVDLFNTNKLPSLLNDGAMDPKVSKHYLLVHDNQDGPADRASKILTEMRSTFGTSDCLLLCINTAQDAPINHQVNPWASYIFDALPSQDLGCFLNIDDIDEIKDLMQDLSSKHIIPNMEQKIRVLNQQVSATRKGFRNQIKNLWWRKGKEDGADSPNGPTYNFNSIESQIRVLGDYAFMLRDYELALSNYRLISTDYKIDKAWKCYAGVQEMMGLTYFMSDQSRKEAEYCMENAFNTYLKLGSLGQQNATRCGLWWIEMLKARDLYKEAATVYFRICGEDILHSAVMLEQASYCYFLSKPSMLRKYGFHLVLSGEQYKKCDQIKHAIRTYGSALSVFKGTTWSYINDHVHFHIGQWYASLGMFDVAVKHMTEILACSHQSKTRQELFLSDFLQIVEKTGQTYEVTKLQLPVINISSLKVTFEDHRTFGSPSAANTREGLWRSLEEEMISSFSAAKTNWLELQSKLISKKQSQSNVCVVGEAVKVNIEFKNPLQISIPISGVTLICKYSANNDEHTSDENVSSVETDNEVDHFRDMSSDNSSFVVSEVDFLLGDGETITVQLSVTPKAVGTLEILGVRWKLSGTIVGFHNFELSHPKKNIVNGRRKAKNSPNEKFKFMVIKSIPKLQGSIHSLPGKAYAGDLRQLVLELRNPSEFPVKNLKMKISHPRFLIIGNQENMKSEFPACLTKKIDSVQSDAHAYHNILSDTVFLFPEGTSVQGETPFLWPLWFRAAVPGDISLYMSIYYEMGDVSSVIRYRTLRLHYNVQVLPSLDVSFQINPSRSRIQEFLVRLDVVNKTSSESFQVYQLSSIGHHWEISLLQPPDTIFPSQTLMAGQAISCFFTLKNSRKLSTLEDNISTMPVRSDVRLIPQSNEDLVYDTNSVPLVSFHHYERLQQEVSQEDLRESNTVDFVLISRLLKSNNNPGLSDPPHVMSHHACHLSTASTGPISWLMDGPLTLHHDFSASFCEINLKMYLYNSSGATAFVRIETLDSAGNGGHMNSVNVVQSATPDNQVGWHDVTPVNELKVTSNVLETQPGKALSLESVSPYIWSGSSSTNLHLKPMSSAEIPLQICVFSPGTYDLSNYVLHWNLQSEGQGDSDETRHHSGKCQGYKYYLTVLQST* 1289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03561 1288 SUPERFAMILY TPR-like 428 550 IPR011990 GO:0005515
Rops8g03561 1288 Pfam ER-Golgi trafficking TRAPP I complex 85 kDa subunit 165 518 IPR024420 -
Rops8g03561 1288 PANTHER TRANSPORT PROTEIN TRAPP 4 1287 IPR024420 -
Rops8g03561 1288 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 636 829 IPR013935 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03561 K20305 - gmx:100813062 2240.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03561 8 75628159 75648443 Rops8g03561 8 75628159 75648443 ECH