Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03553 ATGGCCACCCAGCGCCAACCTTCGGACGCGTTTTCCTTCCTTTCCAAGGGTTGGAGGGAGGTTCGTGACTCGGCAGACGCGGATCTGCGTTTGATGCGTGACCGAGCCAACTCGTTCAAGAACCTAGCGACGTCGTTTGACCGTGAGCTTGAGAACTTCTTCAATTCCGCGGCTCCGTCGTTCTCCGTCCCGGCCATGCGTTCTCCGCCGCCGCCTCCGGCGGAGATCGAATTCATGAAGAAGCTTCAGCCGAAGTTTTCGGAGTTTCGGCGTGCGTATTCGTCCCCTGATTTCAGCAAGAAGGTTCTGGAAAAGTGGAGGCCAAGGACGAGGATTCGAATCGACTTGTCCGCCATAAAAAACGCCATCGTTTCAGAGGAAGCGGAGGAAGGGATTGTGGATTTCGAGAGGGGAAAGAGGGGAAGGAGGTTGAGCTTCTGGGAAGAGTGGAAGGGAGAAGGTGAAACTCGTGATTGGGAACCAATTCGAGCTTTGAAGACAAGGCTGAAAGAGTTTGAGAAGAAAAGTTCCTCTGTGGAGATTTTTGATGGTTTAAAGAACAGTGAATTTCTCGAGAAACTCAAGTCAAGTCTGAAATCGATGTGCAAGGAACCTCAAGAGTCCAAGGATGTGCCACCATTGGATGTACCTGAACTTCTGGCCTACTTTGTTAAGCAGTCTGGGCCATTTTTGGATCAACTTGGAGTGAAAAGAGATGTATGTGACAAGATAGTTGAAAGCTTGTATAGCAAACGCAAGAACCAACTTCTACTGCAGTCCCTTTCTGGGGAAGAATCTTCTGTTCTTGGGAATGGAAACATAAATGATGAATTGGATTTGCGAATAGCTAGTGTCCTTCAGAGTACAGGGCACCGGTATGAAGGTGGATTCTGGTCAGACCATGCAAAGCATGATTTGTCTGACAATGAAAGGCATGTTGCAATAGTCACAACTGCTAGTCTTCCTTGGATGACAGGAACAGCTGTAAACCCACTATTTCGAGCTGCATATTTATCACAATCTCAAAAGCAGAAAGTCACTCTCCTGGTTCCCTGGCTTTGTAAATCAGATCAAGAACTAGTTTATCCCAGTAATCTCACTTTTACTTCACCAGAAGAGCAGGAAGGTTATATACGTAACTGGCTTGAGGAAAGGATTGGTTTTAAGGCAGACTTCAAAATTTCTTTTTATCCTGGGAAGTTTTCAAAAGAAAGACGTAGTATAATACCTGCCGGAGATACTTCTCAATTTATACCATCCAGGGATGCTGACATTGCTATCTTGGAAGAGCCAGAACATTTGAATTGGTATCATCACGGTAAGCGATGGACAGATAAATTCAACCATGTTGTTGGTATTGTCCACACAAATTACTTAGAATACATCAAGCGGGAGAAAAATGGGGCACTCCAGGCATTCCTTGTGAAACACATAAACAACTGGGTTACAAGAGCATACTGCCACAAGGTTCTTCGTCTCTCGGCTGCTACTCAGGATTTACCCAAGTCTGTAGTTTGCAATGTTCATGGTGTGAATCCCAAGTTCTTAAAAATTGGAGAAAAGGTTGCTGCAGAGAGGGAGCTAGGGCAGAAAGCCTTCACAAGAGGGGCATATTTCTTGGGAAAGATGGTATGGGCAAAGGGATATAAGGAGTTGATAGATTTATTAGCAAAGCATAAGGCTGACCTTGATGGCTTCAAGTTGGATGTATTTGGAAATGGAGAGGACGCGAATGAAGTTCAGAGTGCAGCTAGAAGGTTGGATTTGAATCTCAACTTTCAGAAAGGAAGAGATCATGCTGATGATTCTCTTCATGGGTACAAGGTCTTCATAAATCCTAGCATTAGCGATGTACTATGCACGGCTACAGCTGAGGCACTTGCCATGGGAAAATTTGTAGTTTGTGCAGATCATCCTTCAAATGAGTTCTTCAGGTCATTTCCCAATTGTTTGACTTACAAGACATCTGAAGACTTTGTAGCAAAAGTAAAAGACGCATTAGAAAATGAGCCTTATCCTCTCACACCTGAACAAAGGTATCAACTTTCATGGGAGGCTGCTACCCAAAGATTCATGGAATATTCCGAGCTCGACAGAGTTCTGAACAAGGAAAAGGATGGTGCAAAATCAAGTAATGGAAAGCTCATTGCCAAGTCAGCGTCAATGTCTAATCTGACAGGACTAGTAGACGGAGGCTTAGCATTTGCTCACTACTGCCTCACTGGGAATGAATTCCTGAGATTATGTACTGGAGCAATTCCTGGGACACGTGACTACAACAAGCAGCACTGTAAAGACCTTCATCTCTTGCCCCCACAGGTAGAAAATCCTATCTATGGCTGGTAA 2346 0.448 MATQRQPSDAFSFLSKGWREVRDSADADLRLMRDRANSFKNLATSFDRELENFFNSAAPSFSVPAMRSPPPPPAEIEFMKKLQPKFSEFRRAYSSPDFSKKVLEKWRPRTRIRIDLSAIKNAIVSEEAEEGIVDFERGKRGRRLSFWEEWKGEGETRDWEPIRALKTRLKEFEKKSSSVEIFDGLKNSEFLEKLKSSLKSMCKEPQESKDVPPLDVPELLAYFVKQSGPFLDQLGVKRDVCDKIVESLYSKRKNQLLLQSLSGEESSVLGNGNINDELDLRIASVLQSTGHRYEGGFWSDHAKHDLSDNERHVAIVTTASLPWMTGTAVNPLFRAAYLSQSQKQKVTLLVPWLCKSDQELVYPSNLTFTSPEEQEGYIRNWLEERIGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSRDADIAILEEPEHLNWYHHGKRWTDKFNHVVGIVHTNYLEYIKREKNGALQAFLVKHINNWVTRAYCHKVLRLSAATQDLPKSVVCNVHGVNPKFLKIGEKVAAERELGQKAFTRGAYFLGKMVWAKGYKELIDLLAKHKADLDGFKLDVFGNGEDANEVQSAARRLDLNLNFQKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNEFFRSFPNCLTYKTSEDFVAKVKDALENEPYPLTPEQRYQLSWEAATQRFMEYSELDRVLNKEKDGAKSSNGKLIAKSASMSNLTGLVDGGLAFAHYCLTGNEFLRLCTGAIPGTRDYNKQHCKDLHLLPPQVENPIYGW* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03553 781 CDD Glycosyltransferase_GTB-type 442 644 - -
Rops8g03553 781 PANTHER DIGALACTOSYLDIACYLGLYCEROL SYNTHASE 2, CHLOROPLASTIC 1 779 IPR044525 GO:0046481
Rops8g03553 781 Pfam Glycosyl transferases group 1 538 673 IPR001296 GO:0016757
Rops8g03553 781 FunFam Digalactosyldiacylglycerol synthase 1, chloroplastic-like 400 510 - -
Rops8g03553 781 FunFam Digalactosyldiacylglycerol synthase 1, chloroplastic 511 669 - -
Rops8g03553 781 Gene3D Glycogen Phosphorylase B; 537 689 - -
Rops8g03553 781 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 313 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03553 Rops-Chr8 75466925 75473274 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03553 9 605 Glycosyltransferase AT3G11670 70.608 0.0 858
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03553 K09480 - gmx:100796354 1407.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03553 8 75466925 75473274 Rops8g03553 8 75466925 75473274 ECH