Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03550 ATGCAACATACTCAGCAGTCCACCGCGGCACCTTTCTCAACCTCCACTCCTCCTCCCTCCTCCGGTGGCTCCACTGCTGAAGCACCGCCGAAGCAGGTGGCTCTAGCTATGGACAAACTTGGACAAGCTGAAAGAATCATTGCCGACATCAGAATCGGCGCCGATCGCCTCCTTGAAGCTCTATTTGTCGCCGCTGCACAGCCTCATCAAGGCAATAAGCCTCTACAGATTTTCCTCAAAGAAGATGCCTGTATGCGTCAGTATTTTCAAGACCTTCGATCCCTTGGGAAGGAATTGGAAGAGTCTGGAGTTCTCGGTGAATCGGTTCGATCACGGAAAGATTTTTGGGGCTTACATATGCCGCTGGTTTGTCCAGATGGCGCGGTGGTTGCTTATGCTTGGAAACGACAGCTTGCTGGACAAGCCGGTGCATCTGCAGTTGACAGGACTAGGTTAGCTCTGAAAGCCTTCACTGATCAGAAAAGACGCTTTTTCCCCCATCTTGATGATGGACTTGAAACTAATGAACCAGCTTCAAAGAAACGCTGTGGGTCTGAAGAAATTACAGTGGATTCTAAGGAAGAAATTAGTTTTCTTAGGACACTAGCAGATATTCTGAAGTCCTTGGAAAAAGAAGTGCCAAATGTGAAAATTTCAACTTTTGAACGGTTGGACTGGTTAAAAAGAGCTCCCACACTCTCCTCTTCAACAAATGAGAGTTCCCTGGAGCATAACTATCATGGTTCTAATAAGCTAAGGCTAGGATCAGTGGGAACTGTTGCTGCAGAGAAGGTTGCGGTGATAGAATTGTTGTTCCCATCTATCTTCAGAGCTGTTATATCCTTGCATCCTGCTGGTTCTATTGATCCTGATGCGGTAGCTTTTTTTTCTCCAGATGAGAGTGGAAGCTATGTGCATGCAAGGGGGATTTCAGTTCATCATGTGTATAGACATATCACGGAATATGCAGCAATAGCTTTGCAGTATTTTCTTGGGAACCAAACCGAAACGTCTCTGTATTCTCTATTGCACTGGATTTGCAGCCACCAGACTCTGTTTTCAAGACCATGCAGCAAATGTTCAAAGCTACTTGCCATGGATAAACAATCAAATTTACTGTTACCCCCAGTCCACCGTCCATACTGGAAGTTTTCCTTTTCAAAAATTTTGTCAAGCATATCCTTAAAGGACCAGAATTCAGATACTACTCCGGCTTATCATCTTGGCTGCCTCCCTGAGGAAGTGTGA 1248 0.4559 MQHTQQSTAAPFSTSTPPPSSGGSTAEAPPKQVALAMDKLGQAERIIADIRIGADRLLEALFVAAAQPHQGNKPLQIFLKEDACMRQYFQDLRSLGKELEESGVLGESVRSRKDFWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDGLETNEPASKKRCGSEEITVDSKEEISFLRTLADILKSLEKEVPNVKISTFERLDWLKRAPTLSSSTNESSLEHNYHGSNKLRLGSVGTVAAEKVAVIELLFPSIFRAVISLHPAGSIDPDAVAFFSPDESGSYVHARGISVHHVYRHITEYAAIALQYFLGNQTETSLYSLLHWICSHQTLFSRPCSKCSKLLAMDKQSNLLLPPVHRPYWKFSFSKILSSISLKDQNSDTTPAYHLGCLPEEV* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03550 415 MobiDBLite consensus disorder prediction 1 29 - -
Rops8g03550 415 PANTHER 34 KDA TRANSCRIPTIONAL CO-ACTIVATOR-RELATED 6 414 IPR021627 GO:0016592
Rops8g03550 415 Pfam Mediator complex subunit 27 296 410 IPR021627 GO:0016592
Rops8g03550 415 MobiDBLite consensus disorder prediction 1 27 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03550 K15170 - gmx:100782776 690.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03550 8 75421888 75429569 Rops8g03550 8 75421888 75429569 ECH
Rops8g03550 8 75421888 75429569 Rops9g00610 9 8684371 8687789 ECH