Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03548 ATGCAGTCGAAGATCAGCATTTTCTTCAAATCTCCCTCTGCTTCCTCTCCCCCATCCCTCCCGGACGACGACTTGTCTATCTGGGAGAACAAGCGACACCGTATCTTCAACACTTACCACCGAACCCGTCCGAACCCTAACACACCTGGTTCCTCTTCCAAACCGGAAAAAACGGTAACCGGTAAAACCGTCGTGAAGAACAAGAAGAGAAGCTATGCTCAGTTCCACCTTGATTTCGGCCAATCTGATTTCCTCTTACGCCCATGTTCCACTTGTGGAGTCAATTTCACTCCCGGTGATGCTGAAGACGAGAAATCCCATAAGGAATTTCACAAACGTTACACACAAGGGATCCAATTCAGAGGTTGGACAAGCGAAAGGGTTATCCCTGTGCCCAGTGTCAAACAGGGTCGAATCATTTTGGTGTTGGAGACTGATCCATCTGCTCATAGAAACAAGGTTGAAGAAGTTGTGAAAATGATGGAAATCGAGCTAGGAAGTGGATGGATAGTCCATGAACACTGTAAGGTCTACCTGTTTGTTTCTCTCCAGAGGATTGTTGGGTGCCTAGTTGCAGAACCAATCGAAGAAGCATTCAAAGTTGTGTCTTCCCCGATTGCTGGGCATTCTAATAGTGCAAGGAAAAAGGAAACGAGGTCATGTTCAACCACTCTCCAGTTTGGGAACATTATTTTTCAAAGGGAAGTTGAAAAAAAAGCTGTGACAGTGAGTGATTCTGAGGTGATGGAAGGATCGGTTGGTGGGGCAATCTTCTGTGAAAGCAAACCAATTGCTGCTGTTTGTGGCATTAGAGCTATTTGGGTCACTCCCTCCAACAGAAGAAAACACATAGCTAGCCAATTGCTAGATGCTGTTAGGAAAAGTTTCTGCACCGGCCTTAAGCTTGAACGTGCTCAGCTAGCCTTCGCTCAGCCGACCTCAGCTGGAAAGGCATTGGCATCTAGTTACACTGGCACTGGATCATTCTTGGTGTATAAAGCCAACAAAACAGAGGTGTAG 1020 0.4637 MQSKISIFFKSPSASSPPSLPDDDLSIWENKRHRIFNTYHRTRPNPNTPGSSSKPEKTVTGKTVVKNKKRSYAQFHLDFGQSDFLLRPCSTCGVNFTPGDAEDEKSHKEFHKRYTQGIQFRGWTSERVIPVPSVKQGRIILVLETDPSAHRNKVEEVVKMMEIELGSGWIVHEHCKVYLFVSLQRIVGCLVAEPIEEAFKVVSSPIAGHSNSARKKETRSCSTTLQFGNIIFQREVEKKAVTVSDSEVMEGSVGGAIFCESKPIAAVCGIRAIWVTPSNRRKHIASQLLDAVRKSFCTGLKLERAQLAFAQPTSAGKALASSYTGTGSFLVYKANKTEV* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03548 339 PANTHER N-ACETYLTRANSFERASE ECO 27 335 - -
Rops8g03548 339 MobiDBLite consensus disorder prediction 37 61 - -
Rops8g03548 339 Pfam ESCO1/2 acetyl-transferase 265 332 IPR028009 -
Rops8g03548 339 CDD NAT_SF 253 294 - -
Rops8g03548 339 MobiDBLite consensus disorder prediction 40 60 - -
Rops8g03548 339 Pfam zinc-finger of acetyl-transferase ESCO 74 113 IPR028005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03548 Rops-Chr8 75403297 75405130 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03548 K11268 - gmx:100811441 426.402