Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03540 ATGGCCTGCTCAGCTCCCTCTGCTTCTCTCATCTCTTCAAACCCTAACATCCTTTTCTCTCCTTCCCTTTCTGCCCTCTCCATCTCCAATTCCTCTAACTCTCTTTGCAAACCTTTGCGCACTTCCTTCCCTCCATCCATTTCCCTCAAACGCTCTTCTCCTTCTCCTCGCTCCTTCATTGTTAGGGCTTCTAGTGAAGAACTTCCATTAGTTGGGAATACGGCGCCTGATTTTGAAGCAGAGGCTGTTTTTGATCAGGAGTTTATCAAGGTGAAACTATCTGAATATATTGGGAAGAAATATGTGATCCTCTTTTTCTACCCATTGGACTTCACATTTGTTTGTCCAACAGAAATCACTGCTTTCAGTGATCGGTATGCAAAATTTGAGGAACTAAATATAGAGATATTGGGTGTTTCAGTTGACAGTGTGTTCTCGCACCTTGCATGGGTTCAAACAGATAGAAAGTCAGGTGGTCTTGGCGACTTGAAGTACCCTTTGATTTCTGATGTCACCAAATCCATATCAAAATCTTACGGTGTTCTCATTCCTGATCAGGGGATTGCATTGAGAGGATTGTTCATTATTGACAAGGAAGGGGTTATCCAGCATTCTACCATTAACAACCTGGCAATTGGTAGAAGTGTTGATGAGACAAAGAGAACACTCCAGGCCTTGCAGTATGTGCAGGAGAACCCAGATGAAGTTTGCCCTGCTGGGTGGAAGCCTGGAGAGAAGTCAATGAAACCAGACCCTAAACTTAGCAAGGAGTACTTTGCTGCGGTGTAG 789 0.4411 MACSAPSASLISSNPNILFSPSLSALSISNSSNSLCKPLRTSFPPSISLKRSSPSPRSFIVRASSEELPLVGNTAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRYAKFEELNIEILGVSVDSVFSHLAWVQTDRKSGGLGDLKYPLISDVTKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETKRTLQALQYVQENPDEVCPAGWKPGEKSMKPDPKLSKEYFAAV* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03540 262 ProSiteProfiles Thioredoxin domain profile. 69 228 IPR013766 -
Rops8g03540 262 PANTHER THIOREDOXIN PEROXIDASE 66 261 - -
Rops8g03540 262 Pfam AhpC/TSA family 71 204 IPR000866 GO:0016209|GO:0016491
Rops8g03540 262 Gene3D Glutaredoxin 63 262 - -
Rops8g03540 262 CDD PRX_Typ2cys 71 244 - -
Rops8g03540 262 SUPERFAMILY Thioredoxin-like 69 260 IPR036249 -
Rops8g03540 262 FunFam 2-Cys peroxiredoxin BAS1, chloroplastic 63 262 - -
Rops8g03540 262 Pfam C-terminal domain of 1-Cys peroxiredoxin 225 259 IPR019479 GO:0051920
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03540 Rops-Chr8 75199935 75202790 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03540 K03386 - cave:132192196 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03540 8 75199935 75202790 Rops8g03540 8 75199935 75202790 ECH