Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03534 ATGCCCCACTCCCACGAATTCCATGGAACCATTCGCATCAGATCAGTGTGGAGCTCCAATCTCGAATCCGAATTTCAATTGATCCGATCCGTAATCGATTCTTTTCCTCTCATTTCCATGGACACTGAATTCCCCGGCGTCGTCGTTCGCCCCGACACCGGAGATCCCTCATTCCGGCAACCGGCGGAGGCTCACTATGCGGTCCTCAAAGCCAACGTGGACCGTTTGAACCTGATTCAGATCGGACTCACTCTCTCTGACCATAAGGGTAACCTTCCCACACTCGGAACCTCCAATTCTTACATTTGGGAATTCAATTTCAGAGACTTCGACGTGGCCCGTGATGCCCACGCGCATGACTCTGTCGAGTTGCTGAGACGCCAGGGTATTGATTTCGAGAAGAATCGAGAACTCGGGATTGACTCGGTCCGTTTCGCTGAGTTGATGATGTCTTCTGGACTCGTCTGTGACGACGCCGTTAGCTGGGTTACTTTCCACAGTGCCTATGATTTTGGGTATTTGGTGAAGTTACTGACTCAGCGTTCTTTGCCGGAGGAGTTGGTTGAGTTTCTCCGTCTCGTGAGGGTGTTTTTCGGTGATAGGGTTTTTGATGTGAAGCATTTGATGAGGTTTTGCTCGAACCTTCATGGTGGGTTAGACCGTGTTTGCCATTCCCTTAAGGTGGAACGTGTTATTGGGAAAAGTCATCAAGCTGGTTCTGATAGCTTGCTTACTTTGCACGCTTTTCAGAATATTAGGGAACTTTACTTTGGCCAAGTAGAAGGACTTGTTCAGTATGCTGGTGTCTTGTATGGTTTAGAGGCTTCCTGA 831 0.4898 MPHSHEFHGTIRIRSVWSSNLESEFQLIRSVIDSFPLISMDTEFPGVVVRPDTGDPSFRQPAEAHYAVLKANVDRLNLIQIGLTLSDHKGNLPTLGTSNSYIWEFNFRDFDVARDAHAHDSVELLRRQGIDFEKNRELGIDSVRFAELMMSSGLVCDDAVSWVTFHSAYDFGYLVKLLTQRSLPEELVEFLRLVRVFFGDRVFDVKHLMRFCSNLHGGLDRVCHSLKVERVIGKSHQAGSDSLLTLHAFQNIRELYFGQVEGLVQYAGVLYGLEAS* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03534 276 Gene3D - 3 276 IPR036397 GO:0003676
Rops8g03534 276 FunFam Putative CCR4-associated factor 1 7 3 276 - -
Rops8g03534 276 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 11 274 IPR039637 GO:0004535|GO:0030014
Rops8g03534 276 SUPERFAMILY Ribonuclease H-like 13 273 IPR012337 -
Rops8g03534 276 Pfam CAF1 family ribonuclease 16 140 IPR006941 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03534 Rops-Chr8 75112972 75114446 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03534 K12581 - gmx:100790027 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03534 8 75112972 75114446 Rops8g03534 8 75112972 75114446 ECH