Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03532 ATGGGCAACACTCAATCACCTCCCAGTGATCCTCGTTATATTTCATCATCCAGAGCTTTTACTCAAAAGGAACTAGAAGACTTGAGGTCTCTGTTCGATTCATTGGCATCTCAATCCCAAAGCAATGGCAAATACATCTCTCCCTCTGTTTTTGAGTCATATTTTAGACTCAATGGCCCTATTGGGGAGAGGATGTTTGATTTAGTTACTCAGGAATGCAAGGATCAAAGGTTAACCTTTGAAGACCTCGTTGTTGCTAAAGCTACTTATGAGAAAGGAACAAAAGATGAAATTGAAGAATTCATCTTTCGCTTATTAGATGTATCTGGAGATAATTTTGTAGGGAGGTCTGATTTGGAATCTGTTATGATTGCCATTTTTAACAATATATCATGCATAGAAAGTTCTGAAGTTAGATCAAGTTCACAGCAGGACATTGTCAACATATTTCTGAATGCTGCAAATTTCTCCATGCATGATGAAGGGTGCACTGAGGAGAGTATGTCTTTTGAAGATTTCAGAAGTTGGTGTACTCATGTCCCAGCTGTGAGGAAGCTTCTTGGAAGCTTGCTTTTGCCACCTGATTCAGGACGAACAGGTTCTCAAATTCCTAATCTATTGACCTCGAAGGCTATTGATTCTAACATGATACTTCTGCGTAAGGAATATGCTTGGCATATAGGAGGAGCACTTTCTCAGCATGAGCTGGAAGATTGGATGCTTTTGTATCATAGTGCTGTTAAAGGTCTTAGTTTTAATACATTCTTAGGCAACATTTCGAATCATGAAGGCCCAACAGTGTTAATTATTAAGGATACAGAAGGTTATATTTATGGAGGATATGCTTCTCAACCATGGGAGCGGCATGCTGAATTTTATGGAGACATGAAGTGTTACCTTTTTCAACTAAATCCGAAGGCATCTATATTCAGGCCTACTGGAGCGAACAATAATCTACAATGGTGCGCCGTCAACTTCAGTTCAGAGGATATTCCAAATGGTATTGGTTTTGGGGGACGAGTCAATCACTTTGGTTTATTCATCTCAGCCAACTTTGATCAAGGGCACACATTTTCATGTTCTACATTTGGTAGCCCCTGCCTCTCCAAAACAAACCGTATATTGCCAGAAGTAATAGAGTGTTGGGGAGTGACTCAAGGTGCTTCTGTACAAGGCAAAAATGGTGCAGCCAAGGGCACTATACTAGAGAGGTTTAAGGAAGATAGACATATGCTCAATATGGTTGGGCTAGCTAATTCCAGCGAGTAA 1269 0.4019 MGNTQSPPSDPRYISSSRAFTQKELEDLRSLFDSLASQSQSNGKYISPSVFESYFRLNGPIGERMFDLVTQECKDQRLTFEDLVVAKATYEKGTKDEIEEFIFRLLDVSGDNFVGRSDLESVMIAIFNNISCIESSEVRSSSQQDIVNIFLNAANFSMHDEGCTEESMSFEDFRSWCTHVPAVRKLLGSLLLPPDSGRTGSQIPNLLTSKAIDSNMILLRKEYAWHIGGALSQHELEDWMLLYHSAVKGLSFNTFLGNISNHEGPTVLIIKDTEGYIYGGYASQPWERHAEFYGDMKCYLFQLNPKASIFRPTGANNNLQWCAVNFSSEDIPNGIGFGGRVNHFGLFISANFDQGHTFSCSTFGSPCLSKTNRILPEVIECWGVTQGASVQGKNGAAKGTILERFKEDRHMLNMVGLANSSE* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03532 422 ProSiteProfiles TLDc domain profile. 217 385 IPR006571 -
Rops8g03532 422 Pfam TLD 241 384 IPR006571 -
Rops8g03532 422 ProSiteProfiles EF-hand calcium-binding domain profile. 94 129 IPR002048 GO:0005509
Rops8g03532 422 ProSitePatterns EF-hand calcium-binding domain. 107 119 IPR018247 -
Rops8g03532 422 SMART 109ultra 216 385 IPR006571 -
Rops8g03532 422 Gene3D - 1 189 - -
Rops8g03532 422 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 48 385 - -
Rops8g03532 422 SUPERFAMILY EF-hand 4 190 IPR011992 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03532 102 421 EF-hand Containing Proteins AT5G06260 62.422 1.31e-152 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03532 - - gmx:100804508 729.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03532 8 75029215 75039748 Rops8g03532 8 75029215 75039748 ECH