Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03525 ATGGCAAAGGGCTTTCAGTTCACAATTATATGGTTTTCTTCATTTTTTCTACCGTGCCTCACCACCACTTTAGCCCATATCATACCGAGATTTCCTTCCACAGCGGTTCATCCAGAGCTACAGCTACCCTCTGGTTCTTCCCAAAATGGGCTTTACAGAACACAGTTCTTCACCCAAATACTTGATCACTTCAATTATAACCCCCAGAGCTATCAGACTTTTCAACAAAGATATCTCATCAATGAGACCTACTGGGGTGGTGCCAAGAAGAAAGCTCCAATCTTTGTCTACACAGGAAATGAAGGGGACATAGAATGGTTCACACAGAACACAGGCTTTATGTTTGAAAAAGCACCCTATTTCCATGCCCTTTTGGTTTTTATTGAGCATAGATTCTATGGGAAATCATTGCCATTTGGGGGAAACGAGGAGGTTGCAAATGGTAATAGCAGCACACTTGGATATATGAGCTCCACACAGGCATTGGCTGATTATGCAACTCTCATAATTGATCTGAAGAAGAATTTGTCAGCAACTGACTCTCCTGTTGTGGTGTTTGGAGGATCCTATGGAGGAATGCTGGCTGCATGGTTCAGAATGAAGTATCCGCACGTTGCTATTGGAGCCTTGGCATCCTCTGCTCCAATCTTGCAATTTGAGGATTTGGTTTCACCATACACCTTCACTAACATCGTCACTCATGACTACAAGAACGAGAGTGAGAATTGTTACAAAGTGATTAAAGGGTCTTGGAAACAAATAGAAGACACAGCTCAAAAACCCGGAGGACTAGAACAACTGCGAGAATCGTTCACAATATGCGAGAATTATATAAGCGTAGGAGCTCTGAAAAGTTGGCTTCAAACTGCTTTGATTTACGCGGCCATGACAGATTATCCAACACCTTCCAATTTTCTAATTCCCTTGCCAGCTTATCCTGTGAAAAAGATGTGCGAGGCGATTGATAACTTATCCACTGGAAATGACACGTTCACCAAGTTACATGCAGCAGCTAATATCTTCTACAATTATAGCGGGACTGCCTCGTGTTTTAATTTGAGTGATTATTCGAATCCTAATATTCTTGGGGGATGGGATTGGCAGTCATGTACGGAAATGATAATGCCCCTAGGTGGGAACAATGAGGAGAGCATATTTCCAGCTTATGAGTGGAAGTTGGAAGACATTGTCTCGGGCTGCAACCATACCTATCACATAGAACCAAGACCCTATTGGATTCCCACTGAGTTTGGTGGCCATGATATTGAGAGGATTCTGAAAAGGTTTGGGAGCAACATTATCTTCTACAATGGTTTAAGAGACCCTTGGAGTGGTGGAGGGGTGTTGAAGAATATATCAGAAACAATGATTGCGATAGTAGCAAACGAAGGTGCTCATCATGTAGACCTAAGATTCTCAACCAAGGAAGATCCAGAATGGCTAAAGGACGTAAGGAAGCAAGAGATGTGCGAGGCGATTGACAGCTCAGTCACAGGAAATAATACATTGGCCAAGTTGTATGCAGCAGCAAATATCTACTACAACTACTCTGGCACTGCTAAGTGTTTCGATTTGTATGATAATTCAGATCCTCATGATCTTGGAGGATGGCAATGGCAGGATATTATTAGGAGAGTTCTGAAAAGATCTGCAAGCAACATTATCTTCTATAATGGTTTAAGAGACCCTTGGAGTGGTGGAGGGGTGTTGAAGAATATATCAAAAACTTTAGTTGCTATAGTTGCAAAAGAAGGAGCTCATCATACAGACCTAAGGTACTCAACTAAGGAAGATCCAAAGTGGCTTAAAGATGTAAGGAAAAAAGAGATAACGGTATTTCGTCCCTACCCTCAACCAGCTGATGTGGTTGCTGCTGCTGCTGCTCCTACTACTATTGCTGTTGTTCCTCTTACTACTGCTGCTGCTCTTCCTCCTGCTCCATCCTTAGGAGAACTATTACAAGGTTTTAGGCTTATTTTTTGTGTGAGGCCACCTCCAATTAGACCTCCTTCTGTAAGTAATGTTTCCACAACAACAGCTCCTATTGAAAAATTTCCTATGCTATCAATGGTTACTTCAGATACCACCAACACCATGAGGGCAGCAAGCCCAGAGAAGGAGAAGAAGCTGCCTATAGTTGTGAAAGAGGTTCGTGACGATGTGTGA 2166 0.4252 MAKGFQFTIIWFSSFFLPCLTTTLAHIIPRFPSTAVHPELQLPSGSSQNGLYRTQFFTQILDHFNYNPQSYQTFQQRYLINETYWGGAKKKAPIFVYTGNEGDIEWFTQNTGFMFEKAPYFHALLVFIEHRFYGKSLPFGGNEEVANGNSSTLGYMSSTQALADYATLIIDLKKNLSATDSPVVVFGGSYGGMLAAWFRMKYPHVAIGALASSAPILQFEDLVSPYTFTNIVTHDYKNESENCYKVIKGSWKQIEDTAQKPGGLEQLRESFTICENYISVGALKSWLQTALIYAAMTDYPTPSNFLIPLPAYPVKKMCEAIDNLSTGNDTFTKLHAAANIFYNYSGTASCFNLSDYSNPNILGGWDWQSCTEMIMPLGGNNEESIFPAYEWKLEDIVSGCNHTYHIEPRPYWIPTEFGGHDIERILKRFGSNIIFYNGLRDPWSGGGVLKNISETMIAIVANEGAHHVDLRFSTKEDPEWLKDVRKQEMCEAIDSSVTGNNTLAKLYAAANIYYNYSGTAKCFDLYDNSDPHDLGGWQWQDIIRRVLKRSASNIIFYNGLRDPWSGGGVLKNISKTLVAIVAKEGAHHTDLRYSTKEDPKWLKDVRKKEITVFRPYPQPADVVAAAAAPTTIAVVPLTTAAALPPAPSLGELLQGFRLIFCVRPPPIRPPSVSNVSTTTAPIEKFPMLSMVTSDTTNTMRAASPEKEKKLPIVVKEVRDDV* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03525 721 Gene3D alpha/beta hydrolase 56 489 IPR029058 -
Rops8g03525 721 Gene3D alpha/beta hydrolase 500 618 IPR029058 -
Rops8g03525 721 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 549 612 - -
Rops8g03525 721 Gene3D Serine carboxypeptidase S28, SKS domain 224 390 IPR042269 -
Rops8g03525 721 SUPERFAMILY alpha/beta-Hydrolases 112 401 IPR029058 -
Rops8g03525 721 FunFam Dipeptidyl peptidase 7 224 363 - -
Rops8g03525 721 Pfam Serine carboxypeptidase S28 548 608 IPR008758 GO:0006508|GO:0008236
Rops8g03525 721 Pfam Serine carboxypeptidase S28 59 486 IPR008758 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03525 Rops-Chr8 74918135 74949449 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03525 K01285 - gmx:100787376 808.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03525 8 74918135 74949449 Rops8g03525 8 74918135 74949449 ECH