Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03513 ATGCAAAGCCCCACAGAGAAAAACCAAGGTGTCCACACCTATGGTGCCCAATGGCCAATTTTCGCCATAGCATGGTCAATGCGCCGTGGCAAAACCCCTCGTCTCGCTATTGGTAGTTACTTAGAAGAATGTACCAACAAGGTTGAACTTGTCCACTTCAACTATGACACGTTCAATTTCACCACCGACCCTCGTTTGGTACTTGAACACCCTTATGCACCGACAAACATAATGTTCTTTCCCTCTGAAGATGACACAAATCCAGACCTCATTGCCACTTCAGGTGACATCCTAAGATTATGGGAAATCAATGATGAACAAATTCAACTAAAGTCCTCACTAATTGGTAACAAAGTCAGTGATCACTCAGCCATAACTTCCTTTGATTGGGCTGTGTTTGATACCCATCTTGTGGGTACTTCTAGTGTAGACACAACATGCACTATTTGGGACATAGAAAGGGAAGTTATGAACGCACAATTAGTGGCACATGACAAAGAAGTATATGACATTTCATGGGGTGGATTTAATGTCTTTGCTTCCGTGTCTGGTGATGGTTCTGTGAGGGTTTTTGATTTAAGAGACAAAGAAAAATCAACCATAATTTATGAGAATCCAGTGCAAGATTGTCCTTTGCTTCGTTTGGAATGGAATAAAAGTGACCCAAGGTTCATGGCCACGGTAGGACTAAACAGCAACAAGGTGGTAATAATTGATATTAGGCTACCAACCACACCTTTGATGGAGTTAAGTAAACATAGGACATGTGTGAATGGTATATCATGGTCTCCAAATAATGGAAGGCATTTGTGTTCTGTGAGTGATGAGGCAAAGGCTTTGATTTGGGAGGTGATGGACACTGGAATCCCATCAGTGAATAGTGGTGATGAAGTGGAGCCCATGATGTGGTATGGAACATCAGCTGAAATCAATCACGTGCGTTGGTGTCCGGTGCAGATGGACTGGATTGCCCTTGCATTCTTGAATAACTTACAGCTACTCAAGGTGTAA 1011 0.4263 MQSPTEKNQGVHTYGAQWPIFAIAWSMRRGKTPRLAIGSYLEECTNKVELVHFNYDTFNFTTDPRLVLEHPYAPTNIMFFPSEDDTNPDLIATSGDILRLWEINDEQIQLKSSLIGNKVSDHSAITSFDWAVFDTHLVGTSSVDTTCTIWDIEREVMNAQLVAHDKEVYDISWGGFNVFASVSGDGSVRVFDLRDKEKSTIIYENPVQDCPLLRLEWNKSDPRFMATVGLNSNKVVIIDIRLPTTPLMELSKHRTCVNGISWSPNNGRHLCSVSDEAKALIWEVMDTGIPSVNSGDEVEPMMWYGTSAEINHVRWCPVQMDWIALAFLNNLQLLKV* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03513 336 SUPERFAMILY WD40 repeat-like 15 326 IPR036322 GO:0005515
Rops8g03513 336 ProSiteProfiles Trp-Asp (WD) repeats profile. 161 201 IPR001680 GO:0005515
Rops8g03513 336 Gene3D - 9 333 IPR015943 GO:0005515
Rops8g03513 336 SMART WD40_4 154 192 IPR001680 GO:0005515
Rops8g03513 336 SMART WD40_4 243 283 IPR001680 GO:0005515
Rops8g03513 336 SMART WD40_4 107 151 IPR001680 GO:0005515
Rops8g03513 336 SMART WD40_4 198 239 IPR001680 GO:0005515
Rops8g03513 336 ProSiteProfiles Trp-Asp (WD) repeats profile. 250 284 IPR001680 GO:0005515
Rops8g03513 336 Pfam WD domain, G-beta repeat 120 151 IPR001680 GO:0005515
Rops8g03513 336 Pfam WD domain, G-beta repeat 161 192 IPR001680 GO:0005515
Rops8g03513 336 PANTHER WD REPEAT CONTAINING PROTEIN 4 336 IPR045159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03513 Rops-Chr8 74688441 74689451 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03513 K11805 - zju:107416321 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03513 8 74688441 74689451 Rops8g03513 8 74688441 74689451 ECH