Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03512 ATGCTCATATCGCTCGAAAGTCGAAACGCACTGACAAAAATCAGGGGAAAATTTGGAGCAGCTCTGCACTTTTTTCCGTTGAAGAGAATCCTTGTTCCATCGCTTGCAACCGGAAAGCATGGCGATGACAATACACGCCTTGCTGGGCTGGCTTTTATGTTTTCGGCTAGCATCTTGCTACAGATTCTGGCATGTGCTATATACAACAATTGGTGGCCCATGTTATCAGCTCTGATGTATGTGCTGGTACCTATGCCTTGCCTATTCTTTGGAGGAGGATCCACTCAATTTCTGATGAGCCGTGATGGTGGGGGATGGATGGATGCTGCAAAATTTTTGACCGGAGCATCAGCTGTGGGGAGCATAGCCATTCCTATAATCCTTAAGCATGCTCATATGATAGAGACCGGAGCGATGCTCATTGAGCTTGTATCGTTCTTCATATTTGTATGTACTGTTTTGTGTTTCCACCAAGCGAGCCTTGATGATGATTGGTAA 498 0.4558 MLISLESRNALTKIRGKFGAALHFFPLKRILVPSLATGKHGDDNTRLAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWMDAAKFLTGASAVGSIAIPIILKHAHMIETGAMLIELVSFFIFVCTVLCFHQASLDDDW* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03512 165 PANTHER LEPTIN RECEPTOR-RELATED 46 164 IPR007262 -
Rops8g03512 165 Pfam Vacuolar protein sorting 55 48 159 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03512 Rops-Chr8 74681947 74685106 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03512 43 160 EF-hand Containing Proteins AT1G32410 54.545 1.42e-40 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03512 - - pvu:PHAVU_001G192100g 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03512 8 74681947 74685106 Rops8g03512 8 74681947 74685106 ECH