Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03495 ATGACGGAAGTGCTTCAGTTTCCTTCATCTTCAAGCTGTTCCAGAAGTCCATGTGGGCGTCTCACACCCAATGATGGGTCTCATTCAAGTGCCCTTATTAACAGTTCCACAGTGGAGGAAGAAGATGTGGTACAGTCCCATTTGGATTTGGATTTGGATTTGGATTTGGTCACAGAGGCACAGGAAGCTGAAGAACAAGAAGAAGAAGAAGGGAAAGAAAGGGAAAGAGAAGATCAGCTTTCTATTTTAACCCTTTTGATTGATACTTTTAGGAAATCTTTGATTGGTTGCAGCACTAGTACTGGTACTGGTGACCTTTCTTCTTCTTCCATGGAGATTGGGTGGCCTTCTAATGTGAGGCATGTTGCCCATGTTACCTTTGATCGTTTCCATGGTTTTCTTGGTTTGCCAGTTGAATTTGAACCTGAAGTTCCAAGGAGGCCTCCAAGTGCAAGCGCAAATGTTTTTGGGGTTTCCACAGAATCCATGCAGCTTTCTTTTGATGCCAGAGGAAATAGTGTACCTACGATACTGCTGTTAATGCAAAGACATTTGTATGCACGAGGAGGCCTGCAGGCTGAAGGAATCTTTAGAATTAATGCTGAAAATAGTCAAGAGGAGTTTGTGAGGGAACAATTAAACAGAGGTGTAGTACCAGAGCGCATTGACATCCACTGTTTGGCAGGTCTTATAAAGGCTTGGTTCAGAGAACTTCCAACTGGGGTATTGGACCCTCTTTCACCAGAGCAGGTGATGCAGTCCCAGTCTGAAGAAGAATGTGCTCAGCTTGTGAGGCTTCTTCCTCCAACAGAAGCTGCTCTGCTAGATTGGGCTGTAAACCTAATGGCAGATGTTGCTCAATTGGAACATTTGAATAAGATGAATGCACGTAATGTTGCAATGGTTTTTGCACCAAACATGACTCATATGGCTGATCCTTTGACCGCTTTGATGTATGCAGTACAAGTCATGAATTTTCTCAAGACTCTTGTCGTGAAGACACTGAGAGAAAGAGAGGAGTCTATCGTAAAATCAAATCCTGTGTCAAACCTAAATTCTTTTGATGACGACGGGCACCAGAGCGATTCACAAGTGCTTCTCATGGATGGCAGTGAAAATGGAAATGATTGTAGTGATGAGGATACAGTATTTGTCTCTGCAGAACCTTCTCGACAAAGCCCCACGCAAGATGGCCGTGAAACTGAAAGTGGATCCAAAAGTTTGCCAACATATACTGAAAACTTCCTTTCTAGTGGAAATAGGTTGTTGGTTGACAGTTGTCCTTGCAGTGTTGTCTCCCAACTTTGCTCTTTGGCAATTGGACTTCAAGACTCTAGCATTACTACAAAGGGGGAGCAAGCAAAATTTTTGAAGAGCAAAAGCCTTCATTTGATTACTTCTGATATAGACAAGTGTTCCAAAAAGGTGATTGAGCTTCCATTAGCAGGATCTGCAGAGAAGAATAGAGGAACTGCAATCATTGGGCGTATAAATTCAAGAACAGAATTGACTGAAGCTTGGCGTTGA 1527 0.4289 MTEVLQFPSSSSCSRSPCGRLTPNDGSHSSALINSSTVEEEDVVQSHLDLDLDLDLVTEAQEAEEQEEEEGKEREREDQLSILTLLIDTFRKSLIGCSTSTGTGDLSSSSMEIGWPSNVRHVAHVTFDRFHGFLGLPVEFEPEVPRRPPSASANVFGVSTESMQLSFDARGNSVPTILLLMQRHLYARGGLQAEGIFRINAENSQEEFVREQLNRGVVPERIDIHCLAGLIKAWFRELPTGVLDPLSPEQVMQSQSEEECAQLVRLLPPTEAALLDWAVNLMADVAQLEHLNKMNARNVAMVFAPNMTHMADPLTALMYAVQVMNFLKTLVVKTLREREESIVKSNPVSNLNSFDDDGHQSDSQVLLMDGSENGNDCSDEDTVFVSAEPSRQSPTQDGRETESGSKSLPTYTENFLSSGNRLLVDSCPCSVVSQLCSLAIGLQDSSITTKGEQAKFLKSKSLHLITSDIDKCSKKVIELPLAGSAEKNRGTAIIGRINSRTELTEAWR* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03495 508 PANTHER MKIAA1688 PROTEIN 1 395 IPR044785 GO:0005096
Rops8g03495 508 MobiDBLite consensus disorder prediction 1 42 - -
Rops8g03495 508 SMART RhoGAP_3 172 335 IPR000198 GO:0007165
Rops8g03495 508 ProSiteProfiles CRIB domain profile. 113 126 IPR000095 -
Rops8g03495 508 MobiDBLite consensus disorder prediction 1 41 - -
Rops8g03495 508 Gene3D Rho GTPase activation protein 146 345 IPR008936 -
Rops8g03495 508 Coils Coil 57 80 - -
Rops8g03495 508 SMART PBD_5 113 147 IPR000095 -
Rops8g03495 508 MobiDBLite consensus disorder prediction 387 410 - -
Rops8g03495 508 Pfam P21-Rho-binding domain 112 138 IPR000095 -
Rops8g03495 508 MobiDBLite consensus disorder prediction 347 372 - -
Rops8g03495 508 FunFam Rho GTPase-activating protein 5 143 336 - -
Rops8g03495 508 CDD CRIB 111 151 - -
Rops8g03495 508 Gene3D CRIB domain 107 142 IPR036936 -
Rops8g03495 508 ProSiteProfiles Rho GTPase-activating proteins domain profile. 158 343 IPR000198 GO:0007165
Rops8g03495 508 SUPERFAMILY GTPase activation domain, GAP 153 331 IPR008936 -
Rops8g03495 508 CDD RhoGAP 175 330 - -
Rops8g03495 508 Pfam RhoGAP domain 175 309 IPR000198 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03495 Rops-Chr8 74384890 74388882 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03495 - - gmx:100783118 757.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03495 8 74384890 74388882 Rops8g03495 8 74384890 74388882 ECH