Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03487 ATGCTTCCTCTTTGTAACCCTTCTCTTTCTCTGCAACCGAATCTCCTGGCCTCGATTCCAGGAAAACCTAACAACCACTCATCCACTGTCTCCATCACCAACTCTGCCTCTTCCGGCGACGGAATCAGCAACCGCCGAAGAACCATGTCTGCCTTTGAAGCCCGAATCTCGCTTGTTTTCGCCCTTGCTTCTCAAGTCAACACTCTCTCTCAACGACTTGTAGCAGACGTGGCTACCGAGGCTGCGAAATACGTGTTTCCGAAGAGATTTGAAAGCCGCACTCTCGAGGAGGCGTTGATGGCTGTTCCCGACCTTGAGACTGTCAAGTTCAAGGTTCTAAGTAGAGGGGATCCGTATGAGATCAGGGAAGTCGAGCCTTACTTTGTAGCAGAGATTACAATGCCTGGGAAGAGTGGGTTTGATTTCAATGGTGCTTCTCAGTCCTTTAATGTCCTAGCTGAATACCTTTTTGGTAAGAATACAATGAAGGAGAAAATGGAGATGACTACACCTGTTATTACTAGTAAGAATCGATCTGATGGGGTTAAAGTGGATATGACAACTCCTGTGTTAACCACAAAGATCCAAGATCAAGATAAGTGGAAAATGTCTTTTGTCATGCCTTCAAAGTATGGTGCTAACTTGCCACTGCCTAAAGATTCCTCTGTGAGGATTAAAGAGATTCCCAGAAAAATAGTTGCTGTAGTTTCCTTTTCAGGTTTTGTGAATGATGAAGAAGTTAAGCGGCGTGAAATGAAACTACGAGAAGCTTTGAAAAGTGACAAACAGTTTAAAATTAAAGAGGGAACTTCGGTAGAAATTGCACAGTATAATCCACCATTTACTCTTCCATTTCAACGCCGTAATGAGATTGCATTGGAGGTGGAATGGAAAAACAAGTAG 903 0.4374 MLPLCNPSLSLQPNLLASIPGKPNNHSSTVSITNSASSGDGISNRRRTMSAFEARISLVFALASQVNTLSQRLVADVATEAAKYVFPKRFESRTLEEALMAVPDLETVKFKVLSRGDPYEIREVEPYFVAEITMPGKSGFDFNGASQSFNVLAEYLFGKNTMKEKMEMTTPVITSKNRSDGVKVDMTTPVLTTKIQDQDKWKMSFVMPSKYGANLPLPKDSSVRIKEIPRKIVAVVSFSGFVNDEEVKRREMKLREALKSDKQFKIKEGTSVEIAQYNPPFTLPFQRRNEIALEVEWKNK* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03487 300 Pfam SOUL heme-binding protein 173 293 IPR006917 -
Rops8g03487 300 Gene3D Regulatory factor, effector binding domain 104 178 IPR011256 -
Rops8g03487 300 Gene3D Regulatory factor, effector binding domain 179 300 IPR011256 -
Rops8g03487 300 SUPERFAMILY Probable bacterial effector-binding domain 100 175 IPR011256 -
Rops8g03487 300 PANTHER HEME-BINDING PROTEIN-RELATED 75 174 IPR006917 -
Rops8g03487 300 MobiDBLite consensus disorder prediction 20 43 - -
Rops8g03487 300 SUPERFAMILY Probable bacterial effector-binding domain 177 295 IPR011256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03487 Rops-Chr8 74298762 74302088 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03487 - - gmx:100797412 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03487 8 74298762 74302088 Rops8g03487 8 74298762 74302088 ECH