Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03480 ATGGAGAACCTTCCTGTTGAAGTGATTGGTAATATATTATCCCTTCTTGGGTCTGCTCGGGATTGTGTGATTGCCTCTGCAACTTGCAAGAAATGGAGGGAAGCTTGGTGCAATCACCTCCACGCTCTCTCATTCAATGCTTGTTGTGACTGGCTCCTGTATCATGAGTTAACCTCTAGTAGCTTGGAAATACTCATCACTCAAACAATCTTTCAGACCAGAGGACTGCAGTGCTTAACCATTTTCATGGATGATGAGCATGAGTTTTTTGCGGCCCCAGTCATTGCTTGGCTTATGTATACCAGGGATTCCTTGCGCCAGTTACATTATAATGTGAGGACAACTCCTGATTTCAATATCATTGAAAAATGTGGCAGGCAAAGATTGGAAGTGTTGGCCTTGGCTCGCAATTATATTGCAGGTGTTGAGCCTAGTTATCAGAAATTCCCTTGCTTGAAGTCACTGTCATTGAGTTTTGTTAGCATCTCGGCATTGGATTTGAGCCTTCTGCTTTCTGCTTGTCCAAAACTTGAAACCTTGTCTATGGTGAGTCCAGACATTGCCATGTCAGATTCACAGGCTTCTGTAGAGCTTAGCAGCTCTTCTTTGAAGAATTTCTTTGTTGAGTCATTTGGTTTGGATAAATTTATATTGGAGGCGGATTTGCTTGAGAATTTACACCTGAAAGATTGTACCTTTGAGGTTTTTGAATTGATTGGAAAGGGAACATTGAAAGTGCTGAAGATTGATGATGTGAACGTCATCCATCTTGATATTGGGGATAGTACTGAGAACCTTGAGATTGTAGATGTCTGTAACTTCACTATTGTGTGGCCAAAATTTTATCATATGATCTCAAAAGCATCAAAGTTATATAAGCTTCGGCTGTGGGGTGTTGTTTTTGATGATGAAGATGAGGTTGTCGATTTAGAGACACTTTCTGTTTGCTTTCCTCGATTGACGCACCTGTCCTTAAGTTATGATTTAAGAGATGGAGTGCTTCATTATGGCTTGCAGGGTTTGTCTTTTCTGATGAATGTGGTGGTGTTAGAACTTGGATGGACTGTAATCAGTGATCTCTTCTCAGTATGGGTAGCTGGACTTTTGGAAGGATGTCCCAATTTGAAAAAATTGGTCATTTATGGTCTTGTTTCATTGGTCAAAACACATGAAGAGTGTCAAACTTTTGTCAGATTTTCTGAATTCATTCTTCAACTTGGAAGAAAATATAGGCATGTAAGGTTTGAATTTGAATATGAGTAG 1263 0.3998 MENLPVEVIGNILSLLGSARDCVIASATCKKWREAWCNHLHALSFNACCDWLLYHELTSSSLEILITQTIFQTRGLQCLTIFMDDEHEFFAAPVIAWLMYTRDSLRQLHYNVRTTPDFNIIEKCGRQRLEVLALARNYIAGVEPSYQKFPCLKSLSLSFVSISALDLSLLLSACPKLETLSMVSPDIAMSDSQASVELSSSSLKNFFVESFGLDKFILEADLLENLHLKDCTFEVFELIGKGTLKVLKIDDVNVIHLDIGDSTENLEIVDVCNFTIVWPKFYHMISKASKLYKLRLWGVVFDDEDEVVDLETLSVCFPRLTHLSLSYDLRDGVLHYGLQGLSFLMNVVVLELGWTVISDLFSVWVAGLLEGCPNLKKLVIYGLVSLVKTHEECQTFVRFSEFILQLGRKYRHVRFEFEYE* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03480 420 SUPERFAMILY F-box domain 2 39 IPR036047 GO:0005515
Rops8g03480 420 SUPERFAMILY RNI-like 118 385 - -
Rops8g03480 420 Gene3D - 1 37 - -
Rops8g03480 420 PANTHER F-BOX PROTEIN-LIKE 2 381 - -
Rops8g03480 420 Pfam F-box-like 2 37 IPR001810 GO:0005515
Rops8g03480 420 Gene3D Ribonuclease Inhibitor 127 398 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03480 Rops-Chr8 74217607 74219715 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03480 - - gmx:100792331 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03480 8 74217607 74219715 Rops8g03480 8 74217607 74219715 ECH