Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03475 ATGAGGGTGCGAATGCGTATGTCAGGCCCTGTTCTCTTGCTCTTGCTAATTATCGGATTCTTCGAATTCGACGTCGTTTGTTGCTACAGCCGACCACCGCCTCGGAAAACCATCTTTGTCCCAAAAGCCGACAATGACTCCGATTCGCCACAACAGGTACATATATCTCAAGTGGGCCAAGACAAAATGAGGATATCGTGGATTACAGATAGCCCAACCCCTGCAAAAGTTGAGTACGGTCCATCTCCTTCCGCAAACGTATCTTCAGCCACTGGGAGTACCTCTTCGTACCGTTATACTCTCTACAAGTCTGGTGAAATTCACGACGTCGTAATTGGTCCCCTCAAGCCCAACACCGTCTACTACTACCGTTTGGGTGATTCAGCCCAATCATACAATTTCAAGACTCCACCCTCTCAATTTCCAATCAAGTTTGCAGTAGTTGGAGATCTTGGACAGACAGAGTGGACTAAGTCAACATTGGATCATGTAGTTAAGTCAAACTACGACATGCTGCTACTACCAGGGGACCTATCCTACGCAGACAACATCCAACATCTATGGGACTCTTTTGGTCGTTTGGTTGAGCCATTAGCAAGCCAGCGTCCATGGATGGTAACCCAAGGCAACCATGAGGTGGAGAAGATTCCTGTCATCCACACTGAGCCTTTCACTGCTTACAATGCAAGGTGGCGAATGCCATTCGAAGAGAGTGAATCAGACTCTAACCTCTATTATTCTTTTGATGTGGCTGGTGTTCATGTTATCATGTTGGGCTCCTACACTGACTTTAACCCTGATTCTTCACAATACAAATGGCTTCAAGGGGACTTGAAGAAAATAGACAGGGGAAAGACTCCTTGGGTAGTTGTGTTGATTCATGCACCATGGTACAACTCCAACACTGCTCATCAGGGTGAACCTGAATCCGTAAACATGAAGGCAGCCATGGAAGATTTGCTCTTTCATGCCCATGTTGATGTTGTTTTTGCAGGACATGTTCATGCCTACGAACGCTTCACACGGGTTTATAAAGATAAAGGTGACAATTGTGGTCCGGTGCATATCACAATCGGGGATGGGGGTAACCGTGAAGGCCTTGCCACTAGGTACGAAGACCCTAAGCCTGAGATATCAATATTCAGGGAAGCTAGCTTTGGACATGGGATATTTGAGGTGGTTAATGCATCGCATGCAGTTTGGACTTGGCATAAGAATGATAATGATGAACCAGTTGATAGTGACTCTGTCTGGTTAACAAGCCTTTCCTCTGATCCCGCTTGTAAAGTGTGA 1293 0.4617 MRVRMRMSGPVLLLLLIIGFFEFDVVCCYSRPPPRKTIFVPKADNDSDSPQQVHISQVGQDKMRISWITDSPTPAKVEYGPSPSANVSSATGSTSSYRYTLYKSGEIHDVVIGPLKPNTVYYYRLGDSAQSYNFKTPPSQFPIKFAVVGDLGQTEWTKSTLDHVVKSNYDMLLLPGDLSYADNIQHLWDSFGRLVEPLASQRPWMVTQGNHEVEKIPVIHTEPFTAYNARWRMPFEESESDSNLYYSFDVAGVHVIMLGSYTDFNPDSSQYKWLQGDLKKIDRGKTPWVVVLIHAPWYNSNTAHQGEPESVNMKAAMEDLLFHAHVDVVFAGHVHAYERFTRVYKDKGDNCGPVHITIGDGGNREGLATRYEDPKPEISIFREASFGHGIFEVVNASHAVWTWHKNDNDEPVDSDSVWLTSLSSDPACKV* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03475 430 SUPERFAMILY Purple acid phosphatase, N-terminal domain 40 138 IPR008963 GO:0003993|GO:0046872
Rops8g03475 430 Pfam Calcineurin-like phosphoesterase 144 337 IPR004843 GO:0016787
Rops8g03475 430 Pfam Iron/zinc purple acid phosphatase-like protein C 352 414 IPR025733 -
Rops8g03475 430 PANTHER ACID PHOSPHATASE RELATED 21 420 IPR039331 GO:0003993
Rops8g03475 430 CDD MPP_PAPs 139 421 IPR041792 -
Rops8g03475 430 Gene3D - 49 139 - -
Rops8g03475 430 Gene3D - 140 427 IPR029052 -
Rops8g03475 430 SUPERFAMILY Metallo-dependent phosphatases 142 414 IPR029052 -
Rops8g03475 430 Pfam Purple acid Phosphatase, N-terminal domain 50 136 IPR015914 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03475 Rops-Chr8 74109268 74114341 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03475 50 388 Miscellaneous Gene Families AT1G13900 28.087 2.90e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03475 K22390 - gmx:100790228 721.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03475 8 74109268 74114341 Rops8g03475 8 74109268 74114341 ECH