Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03474 ATGTATTCCATCTCATCCTCTCTTTCTTCCACAACCCCATTATATATTTCATCTTCTCTATTCAAAAGGGTACCCTTCACTCGCATCCACAAATTGCAGCAATTAACAAGTCCAAACCAAAACAACATGATGGGAAAATGTACCAAATCTCTAGTTGCATTCCCAGTTCTCATGCACACCCTATTATTGCTTTTGTTCCCACAACCCTTATTATCTCAGGAGAGTGATTTTGTTCGTCAGCCAGCTAGTCAACTCATCATCACTCCCCACCAACGCTCCACTTCAGACCCCCAACAGGTGCATATTTCATTGGTGGGCATAGAGAAGATGAGAGTTTCGTGGATAACTGAAGACAAGCACGCAAAATCTGTGGTGGAGTATGGAACAAAGGCAGGGGAGTATAATGAAAAATCAACGGGGGAGCATACCTCGTACCAATATTTTTTCTATAACTCTGGCAAGATCCACAACACTGTGATTGGGCCTCTGAAACCAAACACCACTTACTACTACAGATGTGGAGGGTCGGGTCCTGAGTTTTCCTTCAAGACACCTCCACCTAAGTTGCCCATTGAATTTGTCATCGTTGGGGACTTGGGACAAACTGAATGGACTGCATCAACCCTGAAACATGTTGACAGCAGTGACTACGACGTGTTCTTGTTACCTGGAGATCTATCCTATGCAGATTCCCAACAACCTTTGTGGGACTCTTTTGGTCGTTTGGTAGAACCATATGCTAGCAAAAGGCCATGGATGGTCACTGAAGGCAACCACGAGATTGAGATTTTCCCCATCATCTACCCACAAGGCTTCAAGGCCTACAATGCCCGCTGGCCCATGCCCTTCCAAGAGAGTGGTTCCACCTCAAATCTTTACTACTCATTTGAGGTTGCTGGCACCCACGTTATCATGCTTGGTTCCTACACTGATTTTGATGTCAATTCACAACAGTACAAGTGGCTTCAATCTGACCTCGCCAACATTGATAGGATGAAGACACCATGGGTGATTGTGTTGTTACATGCGCCTTGGTATAATACTAATGAGGCACACCAAGGTGAAGGTGAAACCATGAGACAAAAAATGGAAGAGTTGCTTTATGAGGCTCGTGTTGACTTGGTTTTTGCTGGCCATGTTCATGCATATGAACGCTTCACTCGAATTTATGACAACAAGGCTAATTCATGTGGTCCTATGTACGTGACAATTGGAGATGGAGGAAACCGCGAGGGACTTGCATTAAAGTTTAAGAACCCTCCAAGCCCACTCTCGTTGTATAGAGAGCCAAGCTTTGGTCATGGAAGGTTAAGGATACTAAATGAAACACATGCATATTGGTCATGGCATCGCAATAATGATACTAATGCAATTGTAGCTGATGGCGTTTGGATAGAGAGTTTGAGCAGCTCGAAAGCATGCTCGAAGGAACCAAATAAACAAGTTGCTCATGAAGACCTGTAA 1464 0.4419 MYSISSSLSSTTPLYISSSLFKRVPFTRIHKLQQLTSPNQNNMMGKCTKSLVAFPVLMHTLLLLLFPQPLLSQESDFVRQPASQLIITPHQRSTSDPQQVHISLVGIEKMRVSWITEDKHAKSVVEYGTKAGEYNEKSTGEHTSYQYFFYNSGKIHNTVIGPLKPNTTYYYRCGGSGPEFSFKTPPPKLPIEFVIVGDLGQTEWTASTLKHVDSSDYDVFLLPGDLSYADSQQPLWDSFGRLVEPYASKRPWMVTEGNHEIEIFPIIYPQGFKAYNARWPMPFQESGSTSNLYYSFEVAGTHVIMLGSYTDFDVNSQQYKWLQSDLANIDRMKTPWVIVLLHAPWYNTNEAHQGEGETMRQKMEELLYEARVDLVFAGHVHAYERFTRIYDNKANSCGPMYVTIGDGGNREGLALKFKNPPSPLSLYREPSFGHGRLRILNETHAYWSWHRNNDTNAIVADGVWIESLSSSKACSKEPNKQVAHEDL* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03474 487 Gene3D - 188 475 IPR029052 -
Rops8g03474 487 CDD MPP_PAPs 190 467 IPR041792 -
Rops8g03474 487 SUPERFAMILY Metallo-dependent phosphatases 190 454 IPR029052 -
Rops8g03474 487 PANTHER ACID PHOSPHATASE RELATED 57 470 IPR039331 GO:0003993
Rops8g03474 487 Pfam Iron/zinc purple acid phosphatase-like protein C 398 455 IPR025733 -
Rops8g03474 487 SUPERFAMILY Purple acid phosphatase, N-terminal domain 87 186 IPR008963 GO:0003993|GO:0046872
Rops8g03474 487 Pfam Purple acid Phosphatase, N-terminal domain 97 184 IPR015914 GO:0003993|GO:0046872
Rops8g03474 487 Pfam Calcineurin-like phosphoesterase 193 383 IPR004843 GO:0016787
Rops8g03474 487 Gene3D - 96 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03474 Rops-Chr8 74090914 74094889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03474 73 479 Miscellaneous Gene Families AT2G03450 26.316 2.31e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03474 K22390 - gmx:100817498 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03474 8 74090914 74094889 Rops8g03474 8 74090914 74094889 ECH