Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03469 ATGGAAACTCAGGTCAACACCGCTCACGGTGGCGTCAACGGTACACTTGGAAACGCCGAGAAGCTCATTATCGATACTGATCCCGGGATCGATGATAGCATGGCGATCTTGATGGCATTTCAGACTTCAGAGGTGGAGGTCCTGGGTTTGACATCCATTTTTGGTAATACTGCTACCGAAGATTCCACACGCAATGCCTTGCTTTTGTGTGAGATCGCAGGCTGTCAAAATGTTCCAGTTGCAGAAGGAAGCTCTGAGCCATTGAAGGGTGGAAAGCCTCGTGTTGCTGATTTTGTTCATGGTAAAGATGGACTGGGGAACTTATTCCTACCCGACCCTAAATCTAAGAAAATTGAAAAGAGTGCCAGTGAGTTTTTAGTTGACAAGGTCTCTGAATATCCTGGTGAAGTAACTGTGCTAGCACTTGGACCACTTACAAACTTAGCTTTAGCAATCAAAAGAGATTCTTCTTTTGCTAGCAAGGTGAGGAGAATAGTTATACTTGGTGGTTCATTCTTTGCCTTGGGGAATGTCAGTCCAGCTGCAGAAGCAAATATCTATGGAGACCCAGAAGCAGCAGATACTGTGTTTACCTCTGGAGCAAATATTGTTGTTGTTGGAATAAACATTACAACCCAAGTCCAATTCACAGATGCTGATCTCCTTGAACTGAAGGAGTCCAAAGGAAAGTATGCTCCTCTCTTGAGTGACATGTGCAAATTCTACAGGGATTGGCATGTGAAATCTGACGGTGTATATGGAATTTTCCTCCACGACCCTGTTAGTTTTGCGGCAGTTGTGCGCCCAGATCTTTTCACATACAAGAGGGGAGTAGTGAGGGTAGAAACACAAGGCCTCTGTGTTGGGCATACACTCATGGACCAAGGATTAAAAAAATGGAATACGAGCAACCCATGGACTGGTTATTCTCCTGTTTCAGTTGCTTGGACTGTGAATGTCGAGGGAGTTCTTAATTATATTAGGGAGCTGTTGATGAAACCCTGA 1005 0.4458 METQVNTAHGGVNGTLGNAEKLIIDTDPGIDDSMAILMAFQTSEVEVLGLTSIFGNTATEDSTRNALLLCEIAGCQNVPVAEGSSEPLKGGKPRVADFVHGKDGLGNLFLPDPKSKKIEKSASEFLVDKVSEYPGEVTVLALGPLTNLALAIKRDSSFASKVRRIVILGGSFFALGNVSPAAEANIYGDPEAADTVFTSGANIVVVGINITTQVQFTDADLLELKESKGKYAPLLSDMCKFYRDWHVKSDGVYGIFLHDPVSFAAVVRPDLFTYKRGVVRVETQGLCVGHTLMDQGLKKWNTSNPWTGYSPVSVAWTVNVEGVLNYIRELLMKP* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03469 334 Pfam Inosine-uridine preferring nucleoside hydrolase 22 323 IPR001910 GO:0016799
Rops8g03469 334 Gene3D - 13 334 IPR036452 GO:0016799
Rops8g03469 334 SUPERFAMILY Nucleoside hydrolase 20 331 IPR036452 GO:0016799
Rops8g03469 334 PANTHER INOSINE-URIDINE PREFERRING NUCLEOSIDE HYDROLASE 20 333 IPR023186 -
Rops8g03469 334 FunFam Probable uridine nucleosidase 1 15 334 - -
Rops8g03469 334 CDD nuc_hydro_CaPnhB 21 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03469 Rops-Chr8 74052366 74055766 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03469 K01240 - gmx:100818908 573.548