Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03460 ATGGAGATCTCAGACGATGATGAACACGTTATCCTTGTTTGCACAAACCCTGATCCAAATCCAATTCAAACAACGGATACCCTAAACAAAGAGATTCTCGTGTCCACCGCAGATATTCTCACTTGGGATTTCCCAACGATTCTCACTTTCCACACGATCAAAGTTCAAGCACATCGCACTAGGCTCATTGAACAATCTTTGTATTTCCGAGGCCTCCTCAGTGGGAGCTTCAGTGAATCATGCTTGGGCTCTATCACTATCAAGTGGAATGTGCCTGTGTTTATGCAAATTCTTAAGCATATGTATGACTGCCCATTGGATATTACCACGGAGAGTGTCCTCTCTCTTTATGAGGGTGCACTTTATTTTGGAGTGGATACACTTATCTTAAAGTGTGAGGCTTGGTTTTCTGAGGTATTCTCACCCGAAGGATTTCAATTAAAACAAATACAAATGGAGGATTTTATCCAAATTTGGAAATTTGGCTTGGATCGTGCAAGTGACTTTATCATGCACTTATGTATGGGCTACCTAGCAAGAAATTTTATGTGGGCAATGAATTGCAAATTTTTTCGAAAAATTCCATATGACCTCCTGTTATCTTCAGTAAAGCACCCTCACTTGACTGTTGACAGTGAGATGCATCTTTCTGATGCACTTCTTCTCTGGCTTGAAAATAACATGGAAAATTTGGAGATGTCGAGCAAAGCTGAAGACAACTGCAATGGAATTTTAAAACAAATTCGTGTGGGCCTTTTGCCTTTGTGGTTTGCTGCAGGAAAAAGAAACTCTCTTTATTTTAAGCAGCTGGCTGAGGAAAGCCTTGATTCAATTTTCAGACCACTGAATATTCTATCTATGGGTTCACTTGAAATTTTCGGGTACAGTGACTTGCAACATCTCAGGATTCTACTGACAGAATATTCAAAGAAAGTGAACCTTTCCGATTGTCCTCAAGTAACATCTGCAGTACTGCTTCTGTCACTCATCCCTTCATCACATCTGATGGACCCCATTCGAAAGAAGTTTATAGAACTTTTCTTAGTTGATTCTGGACATCCCATAAGAGATAAATGTGCATTCCCACAAAAACTGTTAGAAACCTGTACCTTTGAAGCAGTTCAGGAGGTGGATATCTCAAAGTGTCGAAGATTGCTTGTTCAACATGCTGTTGATTGCTTCAGCCAGTCCTTTCCTTCATTAAGAACATTAAGAGCAGCTTATCTTTTGGACATCAGGACAACCAGTTTCCTTCAATTATTGGACAAGTGCCCTTTAGTCTGTGAAATAGACTTGACTGTTGATGTTACTCCACTAATACCGGGATCAGTTACAGTTTTATCCTCTAGTTCTGCCATGATACCACCAGTACCAGAGAAGATCTCTAGTGTAAAATATAAAGCAATGGAAACCATGTCATTCCATGAATCTAGACCTCCACTTTCTAATGTTACAAAACTCACATTGGAAGGAAGAACTGATGTCAGTGATTTGGTTCTCCAGTATATCTCCAAATTCTGTGTTTCATTGTGTCACCTGAATATAAACGGATGCATTTCAGTCACCGATATTGGCATATCAGATCTCATACGTGGATGTAAAAAACTTAATTCAATTGTGGTTTGTGATACTTCATTTGGGATAAACTCAGTTCAAGCTCTTTGCTCAGCTATTTCTGATAGTAGCAACTTTCCCTCTCTACATTCTAGAGATAAGCATTTGAATTCAGTGGCGTCTAATCTTCAAACCCTGCATATGAGTGGCTGCAGAGGTATTTGTGAGTTATCTCTACAAGAACTTATGTCTCAAACACAAGTTTTGAAGAGCTTATGCCTGAGAGGGACTGACCTGGTTGACCAGGAACTGTATAGTTTTAAAGGTTCATCCTTGGAGATACTTGATGTTTCAAATACCAGGATTTCTGGAGCTGCTTTGACATGTTGTTCGTGGAAATCCAAGTTTAAAGTGTCTGAAAGCCAGAGGTTGTAG 1989 0.3962 MEISDDDEHVILVCTNPDPNPIQTTDTLNKEILVSTADILTWDFPTILTFHTIKVQAHRTRLIEQSLYFRGLLSGSFSESCLGSITIKWNVPVFMQILKHMYDCPLDITTESVLSLYEGALYFGVDTLILKCEAWFSEVFSPEGFQLKQIQMEDFIQIWKFGLDRASDFIMHLCMGYLARNFMWAMNCKFFRKIPYDLLLSSVKHPHLTVDSEMHLSDALLLWLENNMENLEMSSKAEDNCNGILKQIRVGLLPLWFAAGKRNSLYFKQLAEESLDSIFRPLNILSMGSLEIFGYSDLQHLRILLTEYSKKVNLSDCPQVTSAVLLLSLIPSSHLMDPIRKKFIELFLVDSGHPIRDKCAFPQKLLETCTFEAVQEVDISKCRRLLVQHAVDCFSQSFPSLRTLRAAYLLDIRTTSFLQLLDKCPLVCEIDLTVDVTPLIPGSVTVLSSSSAMIPPVPEKISSVKYKAMETMSFHESRPPLSNVTKLTLEGRTDVSDLVLQYISKFCVSLCHLNINGCISVTDIGISDLIRGCKKLNSIVVCDTSFGINSVQALCSAISDSSNFPSLHSRDKHLNSVASNLQTLHMSGCRGICELSLQELMSQTQVLKSLCLRGTDLVDQELYSFKGSSLEILDVSNTRISGAALTCCSWKSKFKVSESQRL* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03460 662 ProSiteProfiles BTB domain profile. 44 110 IPR000210 GO:0005515
Rops8g03460 662 Pfam BTB And C-terminal Kelch 157 257 IPR011705 -
Rops8g03460 662 Gene3D Potassium Channel Kv1.1; Chain A 46 163 IPR011333 -
Rops8g03460 662 SMART BTB_4 43 140 IPR000210 GO:0005515
Rops8g03460 662 Pfam BTB/POZ domain 51 134 IPR000210 GO:0005515
Rops8g03460 662 Gene3D Ribonuclease Inhibitor 565 659 IPR032675 -
Rops8g03460 662 SMART LRR_CC_2 578 603 IPR006553 -
Rops8g03460 662 SMART LRR_CC_2 507 532 IPR006553 -
Rops8g03460 662 Gene3D Ribonuclease Inhibitor 439 564 IPR032675 -
Rops8g03460 662 CDD BTB_POZ_ZBTB_KLHL-like 52 123 - -
Rops8g03460 662 PANTHER UNCHARACTERIZED 276 649 - -
Rops8g03460 662 Gene3D - 176 277 - -
Rops8g03460 662 SUPERFAMILY POZ domain 48 135 IPR011333 -
Rops8g03460 662 SUPERFAMILY RNI-like 474 645 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03460 - - lja:Lj4g3v1199760.2 1014.6