Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03450 ATGAGTGAACAGCAAACTCAACCGAACAACCAGTTGGTGGTGCAGAATTCTGGGAGCCTCAGCTTCAGTAGTCACTTGTCTAAGGAAGATGAAGAGATGTCAAGGTCTGCTCTTTCAAACTTTAGGGCCAAGGAGGAAGAGATTGAAAGGAAGAAGATGGAGGTGAGAGAGAAGGTTCAGCTTCAGTTGGGTCGTGTAGAAGAAGAAACCAAGCGTCTTGCTACCATTCGTGAGGAGCTTGAAGCCTTGGCAGATCCGATGAGGAAAGAAGTGGCACTTGTCCGAAAAAAGATTGATTCCGTAAACAAAGAATTAAAACCACTAGGTCATACCTGCCAGAAGAAGGAGAAAGAGTACAAAGAAGCCCTTGAAGCTTTTAATGAAAAGAACAGGGAAAAAGTACAGCTAATCACCAGGTTAATGGAGCTGGTGAGTGAAAGTGAAAAATTGAGGATGAAGAAGCTGGAGGAGCTGAGTAAAAATATAGATTCCATGCAATGA 501 0.4331 MSEQQTQPNNQLVVQNSGSLSFSSHLSKEDEEMSRSALSNFRAKEEEIERKKMEVREKVQLQLGRVEEETKRLATIREELEALADPMRKEVALVRKKIDSVNKELKPLGHTCQKKEKEYKEALEAFNEKNREKVQLITRLMELVSESEKLRMKKLEELSKNIDSMQ* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03450 166 MobiDBLite consensus disorder prediction 1 49 - -
Rops8g03450 166 PANTHER RAB6-INTERACTING PROTEIN GORAB 5 164 IPR007033 -
Rops8g03450 166 Pfam Transcriptional activator 15 164 IPR007033 -
Rops8g03450 166 Coils Coil 112 132 - -
Rops8g03450 166 MobiDBLite consensus disorder prediction 25 49 - -
Rops8g03450 166 Coils Coil 38 58 - -
Rops8g03450 166 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03450 Rops-Chr8 73777210 73779254 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03450 - - gmx:100499923 282.722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03450 8 73777210 73779254 Rops6g02347 6 42699050 42700577 ECH
Rops8g03450 8 73777210 73779254 Rops8g03450 8 73777210 73779254 ECH