Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03421 ATGCATTCCAGTCACTTGCTTCTCGAGGAACCAATTCGGATGGTTTCCATCCTGGAACCATCCAAAGCCAGCTTTTTTCCTGCAATGACGAAGATCGTTGGTACCCTGGGTCCTAAATCTCGATCGGTCGAGGTTATTTCTGGTTGTCTCAAAGCCGGAATGTCTGTTGCTCGTTTCGATTTCTCTTGGTGGGACCCTGAATATCACCAGGAAACTTTGGAGAATTTGAAGGCTGCTATTAAGACTACTAAGAAGCTCTGTGCTGTTATGCTGGACACTGTGGGTGCAGAGATGCAGGTTGTTAACAAAAGTGAGAAGTCAATCTCGCTTGAGGCTGATGCTCAGGTTGTTCTGACTCCTGACCAGGGACAAGAAGCTTCTTCACAGATACTGCCTATCAATTTTGATGGACTAGCCAAGTCAATGAAGAAGGGAGACACCATTTTCGTTGGTCAATACTTGTTCACAGGAAGTGAAACTACTTCTGTATGGCTAGAGGTAACTGAAGTTAAAGGGCAGGACGTTGTTTGTACTATAAAGAATACTGCAACATTGGCTGGATCATTGTTCACTTTGCATGCCTCTCAAATTCATATCGACTTGCCTACCCTCACTGAGAAAGACAAGGAGGTTATAAGCACCTGGGGACTTAAAAACAAAATTGATTTTCTATCATTATCATATACTAGGCATGCTGAAGATGTTCGCCAGGCACGTGAATTCCTTTCCAAATTAGGTGATCTCCGCAAGACTCAAATTTTTGCGAAGATTGAAAATGTTGAGGGATTGGCCCATTTTGATGAGATTCTACAAGAAGCAGATGGTATTATACTCTCCCGTGGGAATTTGGGCATTGATCTTCCACCAGAGAAGGTATTTCTATTTCAAAAATCTGCCCTTTACAAGTGTAATATGGCCGGGAAACCTGCTGTGCTAACACGTGTTGTGGATAGCATGACTGGCAACTTAAGACCAACTCGTGCGGAAGCCACTGATGTTGCCAATGCTGTTTTAGATGGAAGTGATGCAATACTTCTGGGAGCTGAGACTTTACGTGGTTTATACCCTGTTGAGACTATTTCTACAGTTGGCAAAATTTGTGCAGAAGCTGAGAAAGTTTTCAATCAAGACCTTTATTTTAAAAAGACAGTCAAATATGTCGGAGAACCCATGACCCACTTGGAATCTATTGCATCCTCTGCGGTACGAGCAGCTATTAAAGTGAAGGCTTCTGTTATCATTTGCTTCACTTCATCTGGAAGGGCTGCAAGATTGATAGCAAAGTATAGGCCAACTATGCCGGTTCTCTCTGTTGTGGTCCCACAACTTAAGACAAATCAGCTAAAGTGGAGCTTTAGCGGAGCTTTTGAGGCAAGGCAATCACTTATCGTAAGAGGTCTCTTTCCCATTCTTGCTGATCCCCGACATCCTGCCGAGTCAACTAGTGCCTCAAATGAGTCTATTCTAAAGGTAGCCCTTGATCATGGAAAAGCAGCAGGAGTTATAAAGTCACACGATCGAGTGGTTGTTTGCCAGAAAGTTGGTGATGCATCTGTGGTTAAGATTATCGAGCTTGAAGATTAA 1584 0.4324 MHSSHLLLEEPIRMVSILEPSKASFFPAMTKIVGTLGPKSRSVEVISGCLKAGMSVARFDFSWWDPEYHQETLENLKAAIKTTKKLCAVMLDTVGAEMQVVNKSEKSISLEADAQVVLTPDQGQEASSQILPINFDGLAKSMKKGDTIFVGQYLFTGSETTSVWLEVTEVKGQDVVCTIKNTATLAGSLFTLHASQIHIDLPTLTEKDKEVISTWGLKNKIDFLSLSYTRHAEDVRQAREFLSKLGDLRKTQIFAKIENVEGLAHFDEILQEADGIILSRGNLGIDLPPEKVFLFQKSALYKCNMAGKPAVLTRVVDSMTGNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISTVGKICAEAEKVFNQDLYFKKTVKYVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVVPQLKTNQLKWSFSGAFEARQSLIVRGLFPILADPRHPAESTSASNESILKVALDHGKAAGVIKSHDRVVVCQKVGDASVVKIIELED* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03421 527 PANTHER PYRUVATE KINASE 27 512 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops8g03421 527 FunFam Pyruvate kinase 96 202 - -
Rops8g03421 527 Gene3D - 30 370 IPR040442 -
Rops8g03421 527 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 7 375 IPR015813 GO:0003824
Rops8g03421 527 Pfam Pyruvate kinase, barrel domain 30 375 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops8g03421 527 Gene3D - 371 513 IPR036918 -
Rops8g03421 527 Gene3D - 96 202 IPR015806 GO:0004743|GO:0006096
Rops8g03421 527 Pfam Pyruvate kinase, alpha/beta domain 395 522 IPR015795 -
Rops8g03421 527 NCBIfam pyruvate kinase 30 516 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops8g03421 527 SUPERFAMILY PK beta-barrel domain-like 103 186 IPR011037 -
Rops8g03421 527 SUPERFAMILY PK C-terminal domain-like 358 520 IPR036918 -
Rops8g03421 527 PRINTS Pyruvate kinase family signature 85 101 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops8g03421 527 PRINTS Pyruvate kinase family signature 329 347 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops8g03421 527 PRINTS Pyruvate kinase family signature 221 235 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops8g03421 527 PRINTS Pyruvate kinase family signature 348 364 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops8g03421 527 PRINTS Pyruvate kinase family signature 280 304 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops8g03421 527 PRINTS Pyruvate kinase family signature 253 279 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops8g03421 527 FunFam Pyruvate kinase 371 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03421 Rops-Chr8 73274740 73288411 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03421 K00873 - gmx:100807864 982.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03421 8 73274740 73288411 Rops8g03421 8 73274740 73288411 ECH