Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03419 ATGGGGGCCTCAATGTCGAACCACGGTTCGACCATAGGTCCGGGCCTCGGGGACATCCCGGAGGGCTGCGTGGCTCGTGTTTTTCTCCATCTGACTCCGCCGGAGATTTGCAATTTGGCGCGGTTGAATCGCTCCTTTCGCGGCGCTGCCTCCGCCGATTCCGTTTGGGAATCCAAGTTGCCTCCTAACTACCAAGATCTGCTCGATTTCTTGCCTCCTGAACGCTACCAGAATCTTTCCAAGAAGGACATTTTTGCCCTCCTCTCTCGGCCTTTACCGTTTGATGACGGCAACAAGGAAGTTTGGCTTGACAGAGTAACGGGAAGGGTTTGCATGTCCATTTCGGCAAAAGCCATGTCAATTACTGGAATTGATGACCGTAGATACTGGACTTGGATTCCTACTGAAGAATCTAGGTTCAATGCTGTAGCATATTTGCAGCAAATATGGTGGTTTGAAGTGGATGGGGAGGTCAACTTTCCATTTCCTGCTGATATTTATACTCTCTCCTTTAGGCTTCACCTTGGACGATTTTCCAAAAGGCTTGGACGACGCGTATGCAATTATGAACACACTCATGGTTGGGATATAAAACCGGTGAGATTTGAGTTGTCAACTTCAGATGGTCAGCAAGCATCATGTGAGTGCTGCTTAGATGAAACTGAACACGATGACACATACGGAAATCATAAGCGCGGATATTGGGTAGATTACAAGATGGGTGAGTTTATTGTCGATGGATCAGAACCTACAACTAAAGTTCGATTCTCCATGAAACAGATTGATTGTACACACTCCAAAGGTGGGCTTTGTGTAGATTCTGTATTTATTATACCTAGTGATTTGAGAGCGCGCAAGAGAAACGGTATTTTGAAATAA 879 0.463 MGASMSNHGSTIGPGLGDIPEGCVARVFLHLTPPEICNLARLNRSFRGAASADSVWESKLPPNYQDLLDFLPPERYQNLSKKDIFALLSRPLPFDDGNKEVWLDRVTGRVCMSISAKAMSITGIDDRRYWTWIPTEESRFNAVAYLQQIWWFEVDGEVNFPFPADIYTLSFRLHLGRFSKRLGRRVCNYEHTHGWDIKPVRFELSTSDGQQASCECCLDETEHDDTYGNHKRGYWVDYKMGEFIVDGSEPTTKVRFSMKQIDCTHSKGGLCVDSVFIIPSDLRARKRNGILK* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03419 292 Pfam Phloem protein 2 110 279 IPR025886 -
Rops8g03419 292 PANTHER F-BOX PROTEIN PP2-A15 8 287 - -
Rops8g03419 292 ProSiteProfiles F-box domain profile. 13 59 IPR001810 GO:0005515
Rops8g03419 292 CDD F-box_AtSKIP3-like 16 61 - -
Rops8g03419 292 SUPERFAMILY F-box domain 14 82 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03419 Rops-Chr8 73257953 73262293 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03419 - - gmx:100775493 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03419 8 73257953 73262293 Rops8g03419 8 73257953 73262293 ECH