Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03402 ATGAAGCTCCTTGAAAAGGATTTTGCTTTGAACCAAACGGGAACAGTGAAGATAATCCCTGAAGAACCCGATGACCTATGGCACCTTTACAACCTCATCACCCCCGGCGACGTCGTTTCAGCCGACACTACACGCAAAGTGCACCTCGAATCCACCAAGAACACCGCCTCACGTGTCAAGCTCACCCTTCACCTCAAAGTCAAGTGCCGAGACTTCCACAAAGACTCTTCTACCCTCCGTGTCCATGGCCGTAACATTGAAGCCAACCAATTCGTCGCTGCAGGGTCTTTTCACACCTTCAACCTCGAGAGAAACCAACCCTTTCAGCTTCAAAAGAAGCTATGGGGTTCGCAAGCCATCGAAGCCTTAAACGAAACAACAGAAAATTCCACTTCTTCTGATGCTGACATCGTCGTTGTTGTTCTAAAACAACACCATGCAGAGATATACATGGTGGGGAAAGGGGTCACCACTCGTTGTTCAAAAATCGAAGCTTCCTCATCACGCCCCACGAGAAAAGCTTCTAATAACAACGTGTTCTTTCGTGAAGTTTTTGCTGCGTTTGTGAAACACGTGGATTTCGATGTTGTTAAGAATGTGGTGATAGCGAGCGATGATACGAGGAACAAAGAGGAGTTTCGTAGGTTTATATTTTCGGAAGCGAAGAGGTTGAAGATAAAGTGGTTCGAAGAGAACAAGTCACGTATCGTGGTTGTGGGTTCAGGGTGCAATAACTTGAGGGAAGTTTTGGGTGACAGGGCGGTGATGAATGTGATAAAGGACAGTAAGGTAGGGTTGGAGATTAGGGCTTTGGAAGGGTTATGGGACATGGTGACAAACAATTCGGATCGTGCATGTTATGGTCCAAAGAATGTGGAGATTGCACAGGAAATGAGGGCCATTGAGACCCTTTTGATCACTGATGATCTTTATAGGAATAAAGAGATTGAGATGAGGAAAAAGTATGGAGGTTTGGTGAAAGCAGTGAAAGAGGCTGGTGGAAAGGCTATGGTGTATTCCTCCATGCATGTCTCGGCACCACAGCTAGCACAGCTTACGGGTGTTGCAGCTATTCTGAGGTTTCCCTTGCCTGATCTTGAAGACATGGATGAAGTCTAG 1119 0.4638 MKLLEKDFALNQTGTVKIIPEEPDDLWHLYNLITPGDVVSADTTRKVHLESTKNTASRVKLTLHLKVKCRDFHKDSSTLRVHGRNIEANQFVAAGSFHTFNLERNQPFQLQKKLWGSQAIEALNETTENSTSSDADIVVVVLKQHHAEIYMVGKGVTTRCSKIEASSSRPTRKASNNNVFFREVFAAFVKHVDFDVVKNVVIASDDTRNKEEFRRFIFSEAKRLKIKWFEENKSRIVVVGSGCNNLREVLGDRAVMNVIKDSKVGLEIRALEGLWDMVTNNSDRACYGPKNVEIAQEMRAIETLLITDDLYRNKEIEMRKKYGGLVKAVKEAGGKAMVYSSMHVSAPQLAQLTGVAAILRFPLPDLEDMDEV* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03402 372 SUPERFAMILY Dom34/Pelota N-terminal domain-like 1 127 IPR038069 -
Rops8g03402 372 FunFam Protein pelota homolog 1 129 - -
Rops8g03402 372 PANTHER PELOTA 1 371 IPR004405 GO:0070481|GO:0070966|GO:0071025
Rops8g03402 372 Gene3D - 261 372 IPR029064 -
Rops8g03402 372 FunFam Protein pelota homolog 263 372 - -
Rops8g03402 372 SMART eRF1_1_2 1 128 IPR005140 -
Rops8g03402 372 Pfam eRF1 domain 1 1 126 IPR005140 -
Rops8g03402 372 SUPERFAMILY Translational machinery components 132 263 - -
Rops8g03402 372 SUPERFAMILY L30e-like 257 363 IPR029064 -
Rops8g03402 372 NCBIfam mRNA surveillance protein pelota 2 363 IPR004405 GO:0070481|GO:0070966|GO:0071025
Rops8g03402 372 Gene3D eRF1 domain 2 135 259 IPR042226 -
Rops8g03402 372 Pfam eRF1 domain 3 267 363 IPR005142 -
Rops8g03402 372 Gene3D Pelota, domain A 1 129 IPR038069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03402 Rops-Chr8 73084481 73085836 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03402 K06965 - gmx:100803618 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03402 8 73084481 73085836 Rops8g03402 8 73084481 73085836 ECH