Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03380 ATGGCATTCCCTTTAGGTGCCCTCGTGACATTATCATTGCTCTTTCTTGTTGTATTTCCACTTCCTGATGTCCATGCAAACGTTGACTCCTCATGGAGACATACAGCTCACAACATTGTTGGACCTAAAAAGGGGTTTGGCCCCAAACAACATCGCCCCAAGTTTGCTCCTGGCCCATGGAAGCAAGCTCATGCCACCTTCTATGAAGGAGGTTCTGGAACATATGGTTACATACATGAATTTTCACATCTTAATTTGCATGATAATGCTATGTTTCCATACATAATGGTACCATGCCAGAAGCAGGGTGGCATTCGGTTCACCATCACAGGGAATCCTTACTTCAATCTAGTCAAAGTGTGGAATGTTGGAGGAGCTGGGGATGTCATAGGAGTGCAGGTGAAGGGTGATGACAAGCTGAAATGGACAGATTTGAAGCGAAATTGGGGTCAGAAATGGGAGACTGATGCCATGTTAGTGGGAGAGTCATTGACATTTAGGGTAAGAGCAAGTGATGGAAGATTCTCTACTGCATGGCATATTGCCCCCAAGAATTGGCAATTTGGTCAGACCTTTGTAGGCAAAAACTACAAATAA 597 0.4439 MAFPLGALVTLSLLFLVVFPLPDVHANVDSSWRHTAHNIVGPKKGFGPKQHRPKFAPGPWKQAHATFYEGGSGTYGYIHEFSHLNLHDNAMFPYIMVPCQKQGGIRFTITGNPYFNLVKVWNVGGAGDVIGVQVKGDDKLKWTDLKRNWGQKWETDAMLVGESLTFRVRASDGRFSTAWHIAPKNWQFGQTFVGKNYK* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03380 198 Gene3D - 102 197 IPR036749 -
Rops8g03380 198 SUPERFAMILY PHL pollen allergen 101 193 IPR036749 -
Rops8g03380 198 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 114 194 IPR007117 -
Rops8g03380 198 Pfam Expansin C-terminal domain 105 183 IPR007117 -
Rops8g03380 198 PANTHER EXPANSIN-A15 94 196 IPR002963 GO:0009664
Rops8g03380 198 PRINTS Expansin signature 151 172 IPR002963 GO:0009664
Rops8g03380 198 PRINTS Expansin signature 180 196 IPR002963 GO:0009664
Rops8g03380 198 PRINTS Expansin signature 103 115 IPR002963 GO:0009664
Rops8g03380 198 PRINTS Expansin signature 115 136 IPR002963 GO:0009664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03380 Rops-Chr8 72703927 72706201 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03380 94 198 Miscellaneous Gene Families AT5G02260 63.810 3.05e-43 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03380 - - mof:131167406 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03380 8 72703927 72706201 Rops8g03380 8 72703927 72706201 ECH