Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03372 ATGGCAGTAACCTCAACATCACTGGCTTCTCAACTCTCCATTGGGCTTCGCCGCCCTTGTCCCAAGCTCGATTCTTTCAATTCTCAATCTTCCTCTGCTACCCACTACTTTTTCGACACCATTCATTCCAATCTTCGCCTATCCCTCTCTGCTCCCAAACCCTCCCGTGCCGTTGTCGCCATGGCTGGCACTGGCAAGTTCTTTGTAGGCGGCAACTGGAAGTGTAATGGAACAAAAGACTCAATCACTAAGCTTGTCTCTGACTTGAACAGTGCAAAATTGGAGCCTGATGTTGATGTTGTTGTTGCACCTCCCTTTGTGTACATCGATAAGGTGAAAAGCTCAATTACAGATAGGATTGAAATATCTGCCCAGAATTCTTGGGTGGGAAAAGGTGGTGCTTTCACTGGAGAAATCAGTGTGGAACAACTGAAAGACCTTGGATGCAAGTGGGTTATTCTTGGACATTCCGAGCGAAGACATGTTATTGGGGAAAAGGATGAGTTTATAGGAAAGAAAGCTGCCTATGCTTTGAGTGAGGGTCTTGGAGTGATTGCATGCATTGGGGAATTGTTAGAAGAAAGGGAAGCTGGGAAAACTTTTGATGTCTGTTTCCAGCAATTGAAGGCCTTTGCAGATGCAGTGGCTAGTTGGGATAATATTGTCATTGCATATGAACCTGTATGGGCCATTGGAACCGGCAAAGTGGCCACACCCCAGCAAGCTCAGGAAGTACATGCAGCTGTTCGTGATTGGCTTAAAAAGAATGTCTCAGCTGAAGTTGCATCTAAAACACGAATTATTTATGGAGGATCTGTAAATGGGGGCAACAGTGCTGAGCTGGCTAAGCAAGAAGATATTGATGGATTTCTCGTTGGAGGTGCTTCATTAAAGGGTCCGGAGTTCGCAACTATTGTCAATTCAGTGACATCCAAGAAAGTTGCAGCTTGA 951 0.4543 MAVTSTSLASQLSIGLRRPCPKLDSFNSQSSSATHYFFDTIHSNLRLSLSAPKPSRAVVAMAGTGKFFVGGNWKCNGTKDSITKLVSDLNSAKLEPDVDVVVAPPFVYIDKVKSSITDRIEISAQNSWVGKGGAFTGEISVEQLKDLGCKWVILGHSERRHVIGEKDEFIGKKAAYALSEGLGVIACIGELLEEREAGKTFDVCFQQLKAFADAVASWDNIVIAYEPVWAIGTGKVATPQQAQEVHAAVRDWLKKNVSAEVASKTRIIYGGSVNGGNSAELAKQEDIDGFLVGGASLKGPEFATIVNSVTSKKVAA* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03372 316 Gene3D Aldolase class I 49 315 IPR013785 -
Rops8g03372 316 NCBIfam triose-phosphate isomerase 68 298 IPR000652 GO:0004807
Rops8g03372 316 PANTHER TRIOSEPHOSPHATE ISOMERASE 63 308 IPR000652 GO:0004807
Rops8g03372 316 Pfam Triosephosphate isomerase 68 308 IPR000652 GO:0004807
Rops8g03372 316 Hamap Triosephosphate isomerase [tpiA]. 65 308 IPR022896 GO:0004807|GO:0006096
Rops8g03372 316 CDD TIM 67 307 IPR000652 GO:0004807
Rops8g03372 316 FunFam Triosephosphate isomerase 61 310 - -
Rops8g03372 316 ProSitePatterns Triosephosphate isomerase active site. 224 234 IPR020861 GO:0004807
Rops8g03372 316 SUPERFAMILY Triosephosphate isomerase (TIM) 63 309 IPR035990 GO:0004807
Rops8g03372 316 ProSiteProfiles Triosephosphate isomerase (TIM) family profile. 66 308 IPR000652 GO:0004807
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03372 Rops-Chr8 72597978 72602357 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03372 K01803 - gmx:100799358 550.051