Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03358 ATGGCAGGCAAGAAAGATATTTGTTTTCAGAACGAGGCTGTTTTCAATTCGCATAAAGATATCTTTTTGACGAAAACCCAGATTTTGTTTTTACCGGTCAACATGGAGATCGATAAAGCAATCAGAGAGTGTGATGATCGAAGACTTCAGACCAAGTATAACAACGCTACCTATGTCATTCAGAGAGCTTTGGCTTTGTATTCTATTGAGGAGGTTGCCTTCAGTTTCAATGGTGGAAAGGATTCAACGGTTTTGTTGCACCTACTCAGGGCTGGCTATTTCTTGCATAGAGAGGGGCAAAATAGGGCCAATGGGGATCTAAAAGAATTTCCAATTCGAACAATATATTTTGAGAGTCCTTGTGCTTTCCCGGAAATCAACTCATTCACTTATGATACAGCTTCCACCTATGGCTTGCAAATTGACACCATTTGCTTGGATTTCAAGTCTGGTTTGGAGGCTTTGCTAAAGGATAAGCCTATTCGAGCTATTTTCCTTGGCGTTCGAATTGGAGACCCTACTGCGGTTGGCCAAGAACAATTCTCCCCTAGTTCCCCTGGGTGGCCTCCTTTCATGAGAGTGAATCCCATTTTAGATTGGTCATACAGAGATGTGTGGGCCTTCCTTTTAACGTGCAAGGTGAACTATTGCAGCCTTTATGATCAAGGTTATACTTCAATTGGGAGCATATATGACACAGTTCCCAACTCATTATTAGGCATTAGCAATTCTTCCAATAAATTCAAACCAGCATATTTACTTGCTGATGGAAGATTAGAGAGGGCAGGGAGGGTTAAAAGGTCATCTTCTTCTACTTGTGGGCAACTTCCTGCTGATAGCAATGGCTTGACGAGCCTGGATTTGCATAAAAACAGCATGCTCACAGCATCCATCGTTGCCGTGGGAGATGAGATTCTGTTTGGCATTGTTGAGGATCAGTTGGGACCTTATTTGTGTAGGAAGCTGCATTCCGTTGGTTGGTCTGTTTCGCACCTTTCTGTTGTACACAACAACATAGATTCTGTGGCTGAAGAAGTTGATCGACAGAAATCTACTACTGATATGGTATTTATATATGGAGGTGTAGGTCCACTGCATTCAGATGTTACTTTAGCAGGCATTGCAAAAGCTTTTGGTGTTCGTTTGGCTCCTGATGAAGAATTTGAAGAATATCTCAGGCATATTATCAGTGATCAGTGTACTGGTGACAGGAATGAGATGGCTCAATTGCCTGAGGGCATAACTGAATTATTGCATCATGACAAGTTGCCCGTGCCATTGATCAAGTGCCAAAATGTAATAGTTCTTGGTGCAACAAATGTTTTGGAGATGGAAAAGCAGTGGGACTGTTTGATAGAATTAACAAAATCAAGCGACCTACTAACATTGCTGGAACCATATGTATCAAAGCATGTGACAACTAATCTATCAGATGTTGAAGTTGCTCAACCCCTGTCAAAGCTTTGTCTTGAATTTCCAGACATTGATATTGGGTGTTACCGCAAAGCCAGATATGGACCTCTTATTGTAAGTTTCAAAGGAAAGGACCAAGAACGCCTTGAATCAGCTATAAAAGCATTACAGAAGAAGTTTCAATCTGGTGCTTTCATGGAGATGAACTAG 1623 0.4147 MAGKKDICFQNEAVFNSHKDIFLTKTQILFLPVNMEIDKAIRECDDRRLQTKYNNATYVIQRALALYSIEEVAFSFNGGKDSTVLLHLLRAGYFLHREGQNRANGDLKEFPIRTIYFESPCAFPEINSFTYDTASTYGLQIDTICLDFKSGLEALLKDKPIRAIFLGVRIGDPTAVGQEQFSPSSPGWPPFMRVNPILDWSYRDVWAFLLTCKVNYCSLYDQGYTSIGSIYDTVPNSLLGISNSSNKFKPAYLLADGRLERAGRVKRSSSSTCGQLPADSNGLTSLDLHKNSMLTASIVAVGDEILFGIVEDQLGPYLCRKLHSVGWSVSHLSVVHNNIDSVAEEVDRQKSTTDMVFIYGGVGPLHSDVTLAGIAKAFGVRLAPDEEFEEYLRHIISDQCTGDRNEMAQLPEGITELLHHDKLPVPLIKCQNVIVLGATNVLEMEKQWDCLIELTKSSDLLTLLEPYVSKHVTTNLSDVEVAQPLSKLCLEFPDIDIGCYRKARYGPLIVSFKGKDQERLESAIKALQKKFQSGAFMEMN* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03358 540 Gene3D HUPs 28 268 IPR014729 -
Rops8g03358 540 CDD PAPS_reductase 71 228 IPR002500 GO:0003824
Rops8g03358 540 SMART MoCF_biosynth_3a 297 429 IPR001453 -
Rops8g03358 540 FunFam Phosphoadenosine phosphosulfate reductase family protein 292 451 - -
Rops8g03358 540 Pfam Probable molybdopterin binding domain 298 390 IPR001453 -
Rops8g03358 540 SUPERFAMILY Molybdenum cofactor biosynthesis proteins 293 492 IPR036425 -
Rops8g03358 540 PANTHER FAD SYNTHETASE-RELATED FMN ADENYLYLTRANSFERASE 309 512 - -
Rops8g03358 540 Pfam Phosphoadenosine phosphosulfate reductase family 154 234 IPR002500 GO:0003824
Rops8g03358 540 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 46 223 - -
Rops8g03358 540 Gene3D - 292 453 IPR036425 -
Rops8g03358 540 FunFam Phosphoadenosine phosphosulfate reductase family protein 38 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03358 Rops-Chr8 72377283 72386127 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03358 - - lja:Lj0g3v0206069.1 936.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03358 8 72377283 72386127 Rops8g03358 8 72377283 72386127 ECH