Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03341 ATGAAGATCAACTGGAAACAACAACATTGGTGCCAGATGAATGATGTTATGGAAGGACATTTTTCTGTTCTTGCTATCAAGGGTGAAGAAACCAAAAGGTTTATTGTTAAGTTAGATTACTTGGCTGATCCTGAATTCTTGCGACTACTGGACAAGGCTCGAGAGGAGTATGGTTTCAGACAGAAGGGAGCTCTTGCAGTCCCTTGCAGGCCTCAAGAGTTACAGAAGATTCTAGATGATCAAAGTGCACAGAAAGATGGAGGGTCATTTGGGGACAGGAGCGACGTGTTTCATATGCTTTCCACCAAGACAGCTGAGTCAAATGTGTCAAAGGCAGAGCCCCTCAGCAGAAGCATTATTCATCGTGGCATTTGA 375 0.44 MKINWKQQHWCQMNDVMEGHFSVLAIKGEETKRFIVKLDYLADPEFLRLLDKAREEYGFRQKGALAVPCRPQELQKILDDQSAQKDGGSFGDRSDVFHMLSTKTAESNVSKAEPLSRSIIHRGI* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03341 124 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 10 77 IPR003676 GO:0009733
Rops8g03341 124 Pfam Auxin responsive protein 11 78 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03341 Rops-Chr8 72114365 72114901 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03341 13 69 Calmodulin-binding Proteins AT4G34750 45.614 2.06e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03341 - - gmx:100816234 130.568
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03341 8 72114365 72114901 Rops8g03341 8 72114365 72114901 ECH
Rops8g03341 8 72114365 72114901 Rops6g01011 6 24153185 24153511 PCT