Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01011 ATGATAAGGTCTTTTGTTGGGAAGATATGTAAGGGTCTCTCACTAATTTTGCCCAGAAGCCCTGCACTCAGCTACTTCAATGAAAATCTAGTGGAAACCGCAAATGTGGTGCCGGATGATGTTAGGGAAGGATATTTTGCTGTTGTTGCAATAAAGGATGGAGAAACCAAAAGGTTTAGTGTTGAGTTGAACTACTTGAATAATCCTGCATTCTTGGGACTGCTGGACCAAGCTCAGGAAGAGTATGGTTTCAGACAGCAGGGTGCTCTTGCAGTTCCTTGTAGGCCTCAAGAATTACAGAAAATTCTAAAAGGTCAGAAAGCATAA 327 0.419 MIRSFVGKICKGLSLILPRSPALSYFNENLVETANVVPDDVREGYFAVVAIKDGETKRFSVELNYLNNPAFLGLLDQAQEEYGFRQQGALAVPCRPQELQKILKGQKA* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01011 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 31 102 IPR003676 GO:0009733
Rops6g01011 108 Pfam Auxin responsive protein 36 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01011 Rops-Chr6 24153185 24153511 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01011 38 104 Calmodulin-binding Proteins AT3G43120 41.791 1.46e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01011 - K14488 gmx:106795483 167.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03341 8 72114365 72114901 Rops6g01011 6 24153185 24153511 PCT