Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03312 ATGGAGACATGTGGTGAGATAAGGCATTCAAAGTTCAAGAGGATTTGTGTGTTTTGTGGGAGTAGCCCCGGCAAGAAGAGTAGCTATCAAGATGCTGCCATTGAACTTGGCAATGAATTGGTCTCAAGGAACATTGATCTGGTGTACGGAGGAGGAAGCATTGGTCTAATGGGTTTAGTTTCACAAGCTGTTCATGATGGCGGTCGGCATGTCATTGGAGTTATTCCCAAGACGCTCATGCCTCGAGAGCTAACTGGTGAAACGGTGGGAGAAGTAAAAGCTGTGGCAGATATGCATGAAAGGAAAGCAGAGATGGCGAAGCATTCAGATGCCTTTATTGCCTTACCAGGAGGATATGGTACTCTAGAGGAGCTTCTTGAAGTGATAACCTGGGCTCAACTTGGGATTCATGACAAGCCGGTGGGATTAGTAAATGTTGATGGATACTTTAATTCCTTGCTGTCATTTATTGACAAAGCTGTGGAAGAGGGATTTATTAGTCCAAATGCTCGACACATAATTGTATCAGCACCGACAGCAAAAGAGTTAGTGAAGAAATTGGAGGAGTATGTTCCCTGTCATGAGGGTGTTGCTTCGAAGCTAAGCTGGCAGATGGAACAGCAGCTGGCTTACCCTCAAGATTATGACATCTCAAGATAG 660 0.4485 METCGEIRHSKFKRICVFCGSSPGKKSSYQDAAIELGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMPRELTGETVGEVKAVADMHERKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLVNVDGYFNSLLSFIDKAVEEGFISPNARHIIVSAPTAKELVKKLEEYVPCHEGVASKLSWQMEQQLAYPQDYDISR* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03312 219 FunFam CASP-like protein 3 189 - -
Rops8g03312 219 Pfam Possible lysine decarboxylase 57 187 IPR031100 -
Rops8g03312 219 SUPERFAMILY MCP/YpsA-like 11 190 - -
Rops8g03312 219 PANTHER LOG FAMILY PROTEIN YJL055W 8 215 - -
Rops8g03312 219 Gene3D - 4 189 - -
Rops8g03312 219 NCBIfam Rossman fold protein, TIGR00730 family 13 190 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03312 Rops-Chr8 71766659 71770981 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03312 K22522 - gmx:100810030 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03312 8 71766659 71770981 Rops8g03312 8 71766659 71770981 ECH