Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03296 ATGGCAAAGCTATTCCATTTCCTCCCTCTCCTCTTCCTCATCTTCCAAACAATTTCAGCTCAAACAACAGCAGTGGCTCCAGCAGGACCAACCAACATTACTCAAGTGCTAGAGAAGGCAGGGCAGTTCACAACCTTCATTAAGCTACTCAAAACAACCCAAGTAGCTGACCGCATCAATTCACAGCTCAACAACTCAAACCAAGGACTCACCATATTCGCACCTACAGATAATGCATTCTCAAGTCTAAAATCAGGGACACTGAACTCCATAAACTCTCAAGAGCAAATGCAGCTGGTGCAGTTCCATATCCTCCCCACACTCTACACCATGTCACAGTTCCAAACTGCCAGCAACCCATTACACACGCAAGCTGGAAACAGTGACAATGGGGAGTACCCTTTGAACGTCACCACCTCAGGAAACCAAGTGAACGTAACAACTGGGGTTGTGGATACAACTGTGTCCAACACTATATATAGTGATAACCAGCTTGCTGTGTATCAGGTGGATCAGGTGCTCCTTCCTTTGGCACTTTTTGGCCCAGGGCCAACCTCCGCACCAGCAGAGGCTCCGGCGCCAACCAAGCCGGAGAAAAATGTCCGGGCAGCTGACTCACCGTCTGGGTCGTCGGATACATCGGTTGATACTTCGAGTGCAAAGGGTCTGAATAGCCAGACACTTAGCTTCATTGTTGCAATTATTGCCAATGTCATTGTTTCTTGTTTGTGGTTGTAA 738 0.4783 MAKLFHFLPLLFLIFQTISAQTTAVAPAGPTNITQVLEKAGQFTTFIKLLKTTQVADRINSQLNNSNQGLTIFAPTDNAFSSLKSGTLNSINSQEQMQLVQFHILPTLYTMSQFQTASNPLHTQAGNSDNGEYPLNVTTSGNQVNVTTGVVDTTVSNTIYSDNQLAVYQVDQVLLPLALFGPGPTSAPAEAPAPTKPEKNVRAADSPSGSSDTSVDTSSAKGLNSQTLSFIVAIIANVIVSCLWL* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03296 245 SMART fasc_3 71 177 IPR000782 -
Rops8g03296 245 MobiDBLite consensus disorder prediction 204 220 - -
Rops8g03296 245 SUPERFAMILY FAS1 domain 27 176 IPR036378 -
Rops8g03296 245 Gene3D FAS1 domain 14 176 IPR036378 -
Rops8g03296 245 ProSiteProfiles FAS1/BIgH3 domain profile. 30 174 IPR000782 -
Rops8g03296 245 FunFam Fasciclin-like arabinogalactan protein 11 14 176 - -
Rops8g03296 245 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7 225 IPR045003 -
Rops8g03296 245 MobiDBLite consensus disorder prediction 185 220 - -
Rops8g03296 245 Pfam Fasciclin domain 42 176 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03296 Rops-Chr8 71527676 71528413 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03296 - - mtr:11427146 330.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03296 8 71527676 71528413 Rops8g03296 8 71527676 71528413 ECH