Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03168 ATGGCGGATTTAGAAAATTTGCTGTTGGAAGCTGCAGGCAGAAAGCCCTCTGGCTCCCAAGTTCCTTTGAAGAAGAGATTTGATTCGAAGGGAAGAGGAGGTGCTGGTGGTGATGATGATGATAATGGAAGTGATGATGAATCTGATATTGGTGATGATCTTTATAAGAATGATGATGATAGGAAGAAACTTGCTGAGATGACTGAATTTGAGAGAGAGATGATATTATCTGATAGGGCATCCAAGAAGGATGATAAAGGTTTATTGGGAAAGATTACATTAAAACGCGATAAGGGAAATACAATTGTATCAAGAAAAGAAACTCCTCCACCTCTCCCGGTGCGCTCATCCATGAGATCAGCCGACCGATCAACTGCGAAGGATGATGCATTGAATGGATTGCGTGCTAAGCGGTTGAAGCAAAACCAAGATAATGAAGCGCAACAACGCAGGCTCAAAGAAGCATCTAGAACTTCAATGCCAGGGCAATTTTCACCAAAACACAAACCTTTACCATCAACAAGTCCTAGTGGTGAGAGTGAAAGTGATAGTGAAAGTGAAAGTGAAAGTAGGTCCCGGAGTCGCAATGAAGGGTCAAATGGAGATCAAGGGATTATTTACAGTGATGATGATGGGGTAATGTCTGGATTTGAAGTGCCTTTGTTTGAGGATATAAAGGAAATAACCATTCCAAGGTCAAAACTTGCTAAATGGTTTATGGAACCTTTCTTTGAGGAGTTAATTGTTGGTTGTTTTGTTAGAGTTGGTATTGGTAGATCAAAGTCTAGGCCTATTTACAGGCTCTGCATTGTGAAGAATGTGGATGCCTCGGATCGTGATCGGCTGTATAAATTTGAGAATAAAACCACATACAAGTACTTGAATGTTATCTGGGGGAATGAAACTTCTGCTGCGAGGTGGCAATTGGCTATGGTTAGTGATTCTCCTCCTCTTGAGGAGGAGTTTAAACAGTGGGTTAAGGAAGTAGAACGAAGTGGTGGCCGGATGCCAACCAAGCAAGATGTGTTGGGAAAAAAACAAGCTATAAAAAACATCAACTCATTTGTTTACTCAGCAGCTACTGTGAAGCACATGTTAGAGGAGAAAAAGTCTGCCTCACGAAGGCCACTGAATATTGCAGCTGAGAAGGATCGGTTGAGGAGGCAATTGGAAATAGCACAAAGTAAGGATGATGAAGCTGAAGTGGAGAGGATCAAGACAAGGCTGCAAGAACTGGAGGCATCCCGGCAAGCTCAAAAGATGGATGCCAAGGCTTTGAAGCTTGCTGAGATGAACAGAAAGAACAGGTTTGAGAACTTCAAAAATGCTTCTAAATTGAAGCCGGTGAACACAGGTTTAAAAGCAGGAGAAGCAGGCTATGATCCATTCTCAAGGAGATGGACCAGATCAAGGAACTACTATGCTTCAAAACCTGGTGAGGAGGCTGCTGCAGCTGGAGGTAATAGTGCCAGTGGTGCAGTGGCTGATGCAGGCAGGAATGGGAAGGGGACACCTGTGGTTGTGGAGGCTGGCATGGTGGCCACTGCTGCAGCTTTGGAAGCTGCTGCTGGTGCTGGGAAGTTAGTAGACACAAGTGCTCCGGTGGATCAGGGGACAGAGTCAAATGTGCTGCACAATTTTGAGCTGCCAATATCATTAGCTATGCTCCAAAAGTTTGGTGGAGCACAAGGAGCTCGGGCAGGGTATATGGCAAGAAAACAGAGAATAGAAGCAACTGTTGGAGTTCAAGTCCCAGAAAATGATGGAAAGAGGCATCCCATGACATTAACAGTTAGTGATTACAAAAGAAGAAGAGGGCTTCTTTGA 1827 0.4401 MADLENLLLEAAGRKPSGSQVPLKKRFDSKGRGGAGGDDDDNGSDDESDIGDDLYKNDDDRKKLAEMTEFEREMILSDRASKKDDKGLLGKITLKRDKGNTIVSRKETPPPLPVRSSMRSADRSTAKDDALNGLRAKRLKQNQDNEAQQRRLKEASRTSMPGQFSPKHKPLPSTSPSGESESDSESESESRSRSRNEGSNGDQGIIYSDDDGVMSGFEVPLFEDIKEITIPRSKLAKWFMEPFFEELIVGCFVRVGIGRSKSRPIYRLCIVKNVDASDRDRLYKFENKTTYKYLNVIWGNETSAARWQLAMVSDSPPLEEEFKQWVKEVERSGGRMPTKQDVLGKKQAIKNINSFVYSAATVKHMLEEKKSASRRPLNIAAEKDRLRRQLEIAQSKDDEAEVERIKTRLQELEASRQAQKMDAKALKLAEMNRKNRFENFKNASKLKPVNTGLKAGEAGYDPFSRRWTRSRNYYASKPGEEAAAAGGNSASGAVADAGRNGKGTPVVVEAGMVATAAALEAAAGAGKLVDTSAPVDQGTESNVLHNFELPISLAMLQKFGGAQGARAGYMARKQRIEATVGVQVPENDGKRHPMTLTVSDYKRRRGLL* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03168 608 SUPERFAMILY Plus3-like 221 352 IPR036128 GO:0003677
Rops8g03168 608 MobiDBLite consensus disorder prediction 77 103 - -
Rops8g03168 608 FunFam RNA polymerase-associated protein RTF1 220 352 - -
Rops8g03168 608 MobiDBLite consensus disorder prediction 25 39 - -
Rops8g03168 608 SMART rtf1 219 331 IPR004343 GO:0003677
Rops8g03168 608 MobiDBLite consensus disorder prediction 154 181 - -
Rops8g03168 608 Gene3D - 218 351 IPR036128 GO:0003677
Rops8g03168 608 MobiDBLite consensus disorder prediction 77 211 - -
Rops8g03168 608 Coils Coil 383 429 - -
Rops8g03168 608 Pfam Plus-3 domain 224 329 IPR004343 GO:0003677
Rops8g03168 608 Coils Coil 138 158 - -
Rops8g03168 608 PANTHER UNCHARACTERIZED 177 607 - -
Rops8g03168 608 MobiDBLite consensus disorder prediction 1 57 - -
Rops8g03168 608 ProSiteProfiles Plus3 domain profile. 219 354 IPR004343 GO:0003677
Rops8g03168 608 MobiDBLite consensus disorder prediction 121 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03168 Rops-Chr8 69719772 69721598 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03168 K15178 - gmx:100818650 801.971