Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03166 ATGGACTCAAAAGAAGAGGCTGAACCTCATGAGGAGAGGCCCTCATCACCAATGTGGGTCCTACATCAGTTATCTGAGGGGGCATTTAGAGTTGCTGGGGAAGCATTCAACATGTACTCTGGTGGTGGTGGGCCACAAATGGGGCCTGGTGTACATAGACGTAGTCAAAGTGAACTTGTTAATAAAGGATTTCATCGTAGTAACAGCTTTCAGAAGTTAAAAGCTCACATGCATAGGGCATGGAGGTGGGGTGGCAAATCCCGTGAAGAAAGTTCCCTATCCAATTTCAATCCTGAGGTCATGGCAAACCAGAAACGTCTGTGGTATCAGCTTCATCCCAAAGCTCTGGATTGTGTAAATTATAAGGAGCCAACCTCGCTCTTTGAACATTTTGTGATTGTGGGGCTGCATCCAGATGCTAATTTGGAAGTCGTGGAGCATGCATTTGCAAGAAGGAAGAAGTGGGAAAAAGTGAAGGAAAAATCTGAATTTGTAGATTACAGAATGCTGCAGCAACAAAGGCCACCAGAACCAACTTTGGAACCTCAGCTACTTTTCAAATATCCTCCTTCGAAGAGGCTAACAGTGCGTATGAAGGATTTAGCCTCATTTTGCTTTCCTGAAGGTGTTAAGGCATGGTTGTTGGAGAGGACTCCATCTCTAAGTGAACTAAATGAACTCGTCTATGGACAGGAGCATTTAGGCAGAGATGATCTATCATTTATCTTCACACTCAAGGCAGCAGACAATGCAACAATTTATGGAGTTTGCTTACATGTGCATGAAATTGTTCAGAGGCCCCCTGGTATCTTAGGCGTATCATCTCCTCTTTCTCTTCCCTCTGGGGTATGCAGCCGTTTTCTGGTTTCTGCACCTCGCTGTTACTGTCTTCTGACTAAAATTCCCTTCTTCGAGTTGCACTTTGAGATGTTAAACAGTCTCATTGCACAGGAGCGTCTGAATCGGATAACTCAGTTTGTAAATGATATTACTCTCGCTGGTTGCAGTCCATCAACACCTAAACTAGACGATCAAATGAGTTCAAATGCTAACTCCCCAGAGAGGGAGTCCTTTAGTGACTGGATGGCTTGTGCAATACCTCTTGATGGTGCAGCAGCCATTACTGCTGCTGCTGCTGGAATTATATCTGATGATGAAATCCCCCAGTTATCACCCAAAGTATTGGATTTTCACTGTCAATCTCCTGTAAGTGTGACTGCCAGTGATACTTCAGATTTTTGTCAGGTTCGGGATATAGATAAGGATGGCAGGAAGAATCTGCAAGATCATGATAATTGTGCATTTGAGACACCAGAAACTCATGATTCTATGGAAAGAATGCATGAAAATTGTGAAAGTGACCAAGTTGCTTCCAATGTTGGAACACCCCTGTCTTCTCGGAGTCGTGCCTTGGAGCGTCTTGGAAGTTCTGAGTCACTTTTCAGTCCAGTTAGAAGCATGGCATCAGAAGATGAGGATGATCTTTTTTCAAACAATGAAAGAGATTATGGAGACGATTTGTTAATGGAATGGGCTATGGAGAATAAGAATGATTTGCTACAGATAGTGTGTAGATATCATGCTGAACCTATTCCACCTCGAGGGAGTGAATTTGTCTTCCATCCTCTTGAACATCTACAAGCTATTCAGTATATACGACATTCTGTTGATGCTCTTGGCTTCAGTGAAAAAATTTTAAATTGTTCTGAACCGGCTCAGGTCAAAGCAAAGTTGGCAGCTGCTGAGGAAGCCCTTGCTTTATCAGTATGGACAACAGCAACTACTTGTCGAGTTCTGTCCCTTGATAGTGTGCTGGCATTAGTTACAGGAGTGTTGTTGGAAAAACAGGTGGTAATAGTGTGCCCAAATCTGGGTGTTCTATCTGCCACAGTGCTTTCTCTTGTTCCCATGATTCGTCCATTTCAGTGGCAGAGTTTATTGCTCCCGGTGCTACCTGGGAAAATGGTTGATTTTCTTGATGCCCCAGTTCCATATATTGTTGGCATACAACATAAACCAGATGATTTGAATATGAAAACTACTAATCTTGTTCTTGTCAATGTACTGAAGGATCAGGTTAAAATGTGTAACTTGCCAAGACTTCCACAGCATAGAGAGCTTGTGTCTCAGTTAAGTCCAATTCATGCCAGACTTTCACGTGAAGGTTCGATTGCTAGAAAGCATCCTGTACATAGGTGCAACGAAGTCCAGGCTGAAGCTGCAACTCAGTTTTTGAATATCATGTGGCACTATTTGGAGTCACTTTGTTCAGATCTCAAATCCCATACGATAACTAGTGTACAATCAAGTAATGACAGGGTTTCTTTACTTCTTAAAGATAGCTTCATTGATTCCTTTCCTATTAGGGACCAGCCATTCGTTAAGCTATTTGTAGATACACAGCTCTTCACGGTTCTATCAGACTCTCGTTTATCAAGCTTTGAGAGTGCTGATCCCTTGAACATTCTCTCCATGCTGGCTAAAGCATGGGATTACAGCGTTTCAAAATATCCTGAAGGTGTAAAGACTGTTTCCGATGCCAACATTCAGCTTCACAAGTATTTGAGTAGTTTCCAAATTCAAGTATTACGCATCAATAATGTCTAG 2607 0.4246 MDSKEEAEPHEERPSSPMWVLHQLSEGAFRVAGEAFNMYSGGGGPQMGPGVHRRSQSELVNKGFHRSNSFQKLKAHMHRAWRWGGKSREESSLSNFNPEVMANQKRLWYQLHPKALDCVNYKEPTSLFEHFVIVGLHPDANLEVVEHAFARRKKWEKVKEKSEFVDYRMLQQQRPPEPTLEPQLLFKYPPSKRLTVRMKDLASFCFPEGVKAWLLERTPSLSELNELVYGQEHLGRDDLSFIFTLKAADNATIYGVCLHVHEIVQRPPGILGVSSPLSLPSGVCSRFLVSAPRCYCLLTKIPFFELHFEMLNSLIAQERLNRITQFVNDITLAGCSPSTPKLDDQMSSNANSPERESFSDWMACAIPLDGAAAITAAAAGIISDDEIPQLSPKVLDFHCQSPVSVTASDTSDFCQVRDIDKDGRKNLQDHDNCAFETPETHDSMERMHENCESDQVASNVGTPLSSRSRALERLGSSESLFSPVRSMASEDEDDLFSNNERDYGDDLLMEWAMENKNDLLQIVCRYHAEPIPPRGSEFVFHPLEHLQAIQYIRHSVDALGFSEKILNCSEPAQVKAKLAAAEEALALSVWTTATTCRVLSLDSVLALVTGVLLEKQVVIVCPNLGVLSATVLSLVPMIRPFQWQSLLLPVLPGKMVDFLDAPVPYIVGIQHKPDDLNMKTTNLVLVNVLKDQVKMCNLPRLPQHRELVSQLSPIHARLSREGSIARKHPVHRCNEVQAEAATQFLNIMWHYLESLCSDLKSHTITSVQSSNDRVSLLLKDSFIDSFPIRDQPFVKLFVDTQLFTVLSDSRLSSFESADPLNILSMLAKAWDYSVSKYPEGVKTVSDANIQLHKYLSSFQIQVLRINNV* 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03166 868 Gene3D - 116 337 - -
Rops8g03166 868 SMART uDENN_cls 124 261 IPR005113 -
Rops8g03166 868 ProSiteProfiles Tripartite DENN domain profile. 163 817 IPR037516 -
Rops8g03166 868 Gene3D - 588 753 IPR043153 -
Rops8g03166 868 PANTHER DENN DOMAIN-CONTAINING PROTEIN 2 62 815 - -
Rops8g03166 868 Pfam DENN (AEX-3) domain 593 688 IPR001194 -
Rops8g03166 868 Pfam uDENN domain 182 260 IPR005113 -
Rops8g03166 868 SMART DENN_cls 290 691 IPR001194 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03166 Rops-Chr8 69693622 69705501 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03166 - - gmx:100814487 1391.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03166 8 69693622 69705501 Rops8g03166 8 69693622 69705501 ECH