Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03149 ATGACTTTTCTAGAGGGTCATCAAAAAGTGCGTGCTTCTTCATACTTGTACCCCAAAAGCAAGGGAGAGCCACATAAAAGCTATCCTGAATCAGAAAGCATGTTGCTAAGAAGCTCTTCAACACCAGTTCTTGGTTCTTCATTCACAGACAGTTATAGTAATAATATTCACTCTGAAGCCTGTCATGCTCTCAAGCATCTACCACCAGCTGCTAGCCCCCAACATCATCATCACAAACTGTCTTTCTCATGCACTTCTTCTCCAATGTCTCCCTCCATTGTTGACCTTGAAAGACAAAACAAAGGCTTTAGAAGAGTTCAATCTGAAGGGAACTTGGAAGACTTAGCCTACGTTTCTTGCAACAACAACAATGATGACACTTTCAATTATATGGACCCTCCCAAGAGGTTTTCAGCGAGAAATAGATGCTTGGCTCTGGAGACAATTCCATCTTTCCATCTTACTAAGCACAAAAGCTTGAGAGAAGAAGATGAAGATGAAGATGAGGAAGAAGGAGGAGAGTCGGAGGAAGAGGAGAGGGCAATTGAAGGAAAAGGTGATGGGTTCAGTGTGATGAATGGTGGCAGTGGTATGGTATTGACTGAAGAAGTGAAAGTGAAGGATGGATTTTGCAGGGTGGGCTTTGGTGACCAGGAAGAGGTTGGTAGTAAAGAAATGTTGTATCTTGCAAAGGGTCTTGGTGTTGATGTCTGTGGTGATGGCATGGGTGGCTGCAGAGGTGGTGGTGGTGGTGGTGGAGGCAGTGGAGGTGGTGATCATAATTCCATGGGCTCTGGAGGGAATGATGGAGACATGCATGGGGTGGAAGAATATTACAAGAAAATGGTGGAGGAAAATCCTGGGAATCCCTTGTTTCTTAGGAATTATGCTCAGTTTTTGTACAAGTGCAAAGAAGACCGTGAAGGAGCTGATGAGTACTATTCCCGTGCCATACTAGCCGACCCAAAAGATGGAGAAGTGCTATCACAGTATGGCAAGCTAGTTTGGGAGCTACATCATGACCAAGAAAGAGCCTCAAGCTATTTTGAACGAGCAGTCCAAGCCTCTCCTGAAGACAGCCATGTACATGCAGCATATGCTAGTTTCCTTTGGGACACAGAGGAAGGCGATGATGATTGCAATGAGCCACAATGTTTACCACCAAATTTTCATCTGGGAGCTATGGCTGCTACAGGTGTTTAA 1203 0.4472 MTFLEGHQKVRASSYLYPKSKGEPHKSYPESESMLLRSSSTPVLGSSFTDSYSNNIHSEACHALKHLPPAASPQHHHHKLSFSCTSSPMSPSIVDLERQNKGFRRVQSEGNLEDLAYVSCNNNNDDTFNYMDPPKRFSARNRCLALETIPSFHLTKHKSLREEDEDEDEEEGGESEEEERAIEGKGDGFSVMNGGSGMVLTEEVKVKDGFCRVGFGDQEEVGSKEMLYLAKGLGVDVCGDGMGGCRGGGGGGGGSGGGDHNSMGSGGNDGDMHGVEEYYKKMVEENPGNPLFLRNYAQFLYKCKEDREGADEYYSRAILADPKDGEVLSQYGKLVWELHHDQERASSYFERAVQASPEDSHVHAAYASFLWDTEEGDDDCNEPQCLPPNFHLGAMAATGV* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03149 400 SMART hat_new_1 340 372 IPR003107 GO:0006396
Rops8g03149 400 SMART hat_new_1 305 337 IPR003107 GO:0006396
Rops8g03149 400 SMART hat_new_1 270 302 IPR003107 GO:0006396
Rops8g03149 400 MobiDBLite consensus disorder prediction 15 34 - -
Rops8g03149 400 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 34 375 - -
Rops8g03149 400 Gene3D Tetratricopeptide repeat domain 267 381 IPR011990 GO:0005515
Rops8g03149 400 MobiDBLite consensus disorder prediction 156 193 - -
Rops8g03149 400 SUPERFAMILY TPR-like 271 375 IPR011990 GO:0005515
Rops8g03149 400 MobiDBLite consensus disorder prediction 251 271 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03149 - - gmx:100788436 453.751