Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03143 ATGGCCAAGTTTTTGGCACTTTCACTAGTCGTCTCAAACCTCTTCATTGGCCTAGTGAGTGCAGATTGGAACATATTGAACCAAAGATGGAAAAAAGGAGTTGGAGCCAACTTAAAGAACTATTGTGAGAGTTGGAGGATCAATGTTGAACTAAACAACATTAAGGGGTTCAATATTGTACCTCAAGAATGTGTGGACCACGTGAAGAAATACATGACTTCTTCTCAATACAAAGCTGACTCTGAGAGGGCAGTGGAGGAGGTTAGGCTCTATTTGAGTGGATGCTGCACTTTGAAAGGTGATGGCAAAGATTCCTGGATTTTTGATATTGATGAGACCCTTTTGTCCACAATTCCTTATTATAAGAAGCATGGTTTTGGGGGAGAAAAGCTGAATGCAACCTCTTTAGAAGCTTGGATGAAGGAAAGCAATGCACCAGCTCTGGATCACACACTCCAGCTCTTCCATGAAATCAAGAACAAAGGGATCAAAATCTTTCTGATTTCTTCAAGAAAGGAAACCCTTAGATCTCCCACTGTAGAAAACCTTGTGAAGGTTGGGTACCATGGATGGACTAGTCTCACATTGAGGGGTCTTGATGATGAATTGATGGAAGTGAAAAAGTACCATTCCAAGGTGAGGCAACAATTGGTTGATGAAGGTTACCGCATATGGGGCATTGCTGGAGATCAATGGAGCAGTTTTGAAGGGCTTCCATTTGCAAAGAGAACATTCAAACTACCCAATTCCATGTACCATATAGCATAA 768 0.4154 MAKFLALSLVVSNLFIGLVSADWNILNQRWKKGVGANLKNYCESWRINVELNNIKGFNIVPQECVDHVKKYMTSSQYKADSERAVEEVRLYLSGCCTLKGDGKDSWIFDIDETLLSTIPYYKKHGFGGEKLNATSLEAWMKESNAPALDHTLQLFHEIKNKGIKIFLISSRKETLRSPTVENLVKVGYHGWTSLTLRGLDDELMEVKKYHSKVRQQLVDEGYRIWGIAGDQWSSFEGLPFAKRTFKLPNSMYHIA* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03143 255 NCBIfam plant acid phosphatase 29 254 IPR010028 GO:0003993
Rops8g03143 255 FunFam Vegetative storage protein 1 38 255 - -
Rops8g03143 255 CDD HAD_VSP 68 254 - -
Rops8g03143 255 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 38 254 IPR005519 -
Rops8g03143 255 SUPERFAMILY HAD-like 97 252 IPR036412 -
Rops8g03143 255 PIRSF VSP 1 255 IPR014403 -
Rops8g03143 255 Gene3D - 38 255 IPR023214 -
Rops8g03143 255 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 24 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03143 Rops-Chr8 69311771 69314102 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03143 - - gmx:100785781 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03143 8 69311771 69314102 Rops8g03143 8 69311771 69314102 ECH