Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03125 ATGGCTAACAAACTGAAACAGTTTCTTTGCTTGTTGGTCCTCTCCGCCGTTCTTGCCGTAGCCGGAGCATCTTCGAGCGACGGCGCCGAGCTCGATTACTCGAAGCTCTCCGGCATTATAATCCCTGGCTTTGCGTCTACTCAGCTTCGAGCATGGTCTATTCTTGACTGTCCTTATTCTCCTCTCGATTTCAATCCTCTCGATTTGGTTTGGCTTGACACTACCAAACTTCTTTCTGCTGTGAATTGCTGGCTTAAGTGCATGGTACTGGATCCTTATAACCAAACAGATCATCCTGATTGCAAGTCTCGTCCTGATAGCGGTCTTTCTAGTATTACAGAACTTGATCCAGGTTATATAACAGGACCTCTTTCTTCAGTGTGGAAAGAATGGATTAAGTGGTGTATTGAATTTGGCATAGAAGCTAATGCAATAATTGCTGTCCCTTATGATTGGAGATTGTCACCGTCCATGCTTGAAGAACGAGACCTTTACTTTCACAAGCTAAAATTGACATTTGAAACTGCTTTTAAACTTCGTGGTGGCCCCTCTTTAGTTTTTGCCCATTCACTGGGTAATAATGTTTTTCGTTATTTCTTGGAGTGGTTGAAGCTAGAGATTGCACCCAAACATTATATCCAATGGCTGGATCAACATATCCATGCCTACTTTGCTGTTGGAGCTCCCCTTCTTGGTGCAACTGAAACCATTGAAGCGACACTTTCTGGATTCACATATGGTCTTCCTATATCTGAGGGAACAGCTCGATTGATGTTCAACTCCTTTGGTTCATCATTATGGATGATGCCTTTTTCCAAGTACTGTAGAACAGATAATAAATATTGGAAGCATTTTTCTGGTGGAAGGCATGTAGGTAACCATACATATCACTGTGATGAGCAAGAGTTTCGGTCAAATTTATCTGGATGGCCAACAAAGATGATCAACATTGAAATCCCCTCTAGTCGTGGATTTGATGCATATCCTTCATTCTCAGAAATACCCGAGGCCAACTTGTCCAGCACAGAATGTGGACTACCTACTCAATTATCTTTCTCAGCTCGTGAAATATCAGATGGCACATTTTTTAAGGCAATTGAAGATTATGACCCGGACAGCAAGAGGCTCTTGTACCAGTTAGAGAAATCATATCTTAGTGATCCTGTTCTTAATCCTCTTACACCTTGGGACCGGCCACCAATAAAAAATGTCTTCTGCATTTATGGCACTGAGTCAAAGACAAAGGTTGGTTACTACTTTGCCCCTAGTGGCAAGCCTTACCCAGACAACTGGATCATTACAGATGTCATTTATGAGTCTGAAGGATCTCTAATCTCAAGGTCAGGGAATTTGGCTGAAGGGAACCCTGGAGCCACAAGTGGTGATGAGACAGTACCATACAACTCTCTTTCCTCGTGCAAGAGCTGGCTTGGACCAAAGGTGAACATAACAAGAGCTCCTCAGTCAGAACATGATGGTTCAGATGTACAGATTAAACTGAATGTGGAACATCACGATGATGAAGATATTGTTCCAAACATGACAAGATCACCTAGGGTTAAGTACATAACATACTATGAAGATTCTGAAAGTCTTCCTGGAAAGAGGACAGCAGTTTGGGAGGTTGATAAAGCAAATCACAGGAACATAGTGAGATCACCAGTGCTAATGAGGGAGTTATGGCTTGAGATGTGGCATGATGTTCATCCTGATGCAAGATCAGAGTTTGTCACAAAAGCTAAGCGTGGACCTTTAAGAGAGGAGGACTGTTATTGGGATTATGGGAAAGCTCGCTGTGCATGGCCAGAATATTGTGAATATAGGTATATTTTTGGTGATGTTCACTTGGGACAAAGCTGCAGGTTGAGATATACTTCAACTGATTTGTTGTTGCAATATGTATAA 1905 0.422 MANKLKQFLCLLVLSAVLAVAGASSSDGAELDYSKLSGIIIPGFASTQLRAWSILDCPYSPLDFNPLDLVWLDTTKLLSAVNCWLKCMVLDPYNQTDHPDCKSRPDSGLSSITELDPGYITGPLSSVWKEWIKWCIEFGIEANAIIAVPYDWRLSPSMLEERDLYFHKLKLTFETAFKLRGGPSLVFAHSLGNNVFRYFLEWLKLEIAPKHYIQWLDQHIHAYFAVGAPLLGATETIEATLSGFTYGLPISEGTARLMFNSFGSSLWMMPFSKYCRTDNKYWKHFSGGRHVGNHTYHCDEQEFRSNLSGWPTKMINIEIPSSRGFDAYPSFSEIPEANLSSTECGLPTQLSFSAREISDGTFFKAIEDYDPDSKRLLYQLEKSYLSDPVLNPLTPWDRPPIKNVFCIYGTESKTKVGYYFAPSGKPYPDNWIITDVIYESEGSLISRSGNLAEGNPGATSGDETVPYNSLSSCKSWLGPKVNITRAPQSEHDGSDVQIKLNVEHHDDEDIVPNMTRSPRVKYITYYEDSESLPGKRTAVWEVDKANHRNIVRSPVLMRELWLEMWHDVHPDARSEFVTKAKRGPLREEDCYWDYGKARCAWPEYCEYRYIFGDVHLGQSCRLRYTSTDLLLQYV* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03125 634 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 34 606 - -
Rops8g03125 634 Gene3D alpha/beta hydrolase 95 258 IPR029058 -
Rops8g03125 634 Pfam Lecithin:cholesterol acyltransferase 68 504 IPR003386 GO:0006629|GO:0008374
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03125 2 634 Acyl Lipid Metabolism Gene Families AT1G04010 75.078 0.0 1026
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03125 - - gmx:100806466 1219.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03125 8 69176119 69188568 Rops8g03125 8 69176119 69188568 ECH